Analysis of interatomic Contacts of Structural Units in PDB entry:
8EWY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8EWY entry

There are 4 chains in PDB entry 8EWY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 32	LYS 1153
B	PRO 32	LYS 1153
C	PRO 255	LEU 291
D	PRO 255	LEU 291

There are104 helices in PDB entry 8EWY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	57	69	Right-handed alpha
Helix 2	AA2	A	74	76	Right-handed 310
Helix 3	AA3	A	151	168	Right-handed alpha
Helix 4	AA4	A	178	205	Right-handed alpha
Helix 5	AA5	A	207	211	Right-handed 310
Helix 6	AA6	A	216	221	Right-handed 310
Helix 7	AA7	A	222	231	Right-handed alpha
Helix 8	AA8	A	233	254	Right-handed alpha
Helix 9	AA9	A	254	260	Right-handed alpha
Helix 10	AB1	A	262	278	Right-handed alpha
Helix 11	AB2	A	398	417	Right-handed alpha
Helix 12	AB3	A	424	428	Right-handed 310
Helix 13	AB4	A	429	439	Right-handed alpha
Helix 14	AB5	A	445	457	Right-handed alpha
Helix 15	AB6	A	517	525	Right-handed alpha
Helix 16	AB7	A	526	528	Right-handed 310
Helix 17	AB8	A	557	562	Right-handed alpha
Helix 18	AB9	A	578	580	Right-handed 310
Helix 19	AC1	A	625	629	Right-handed 310
Helix 20	AC2	A	630	644	Right-handed alpha
Helix 21	AC3	A	673	681	Right-handed alpha
Helix 22	AC4	A	682	685	Right-handed 310
Helix 23	AC5	A	686	707	Right-handed alpha
Helix 24	AC6	A	715	717	Right-handed 310
Helix 25	AC7	A	742	746	Right-handed 310
Helix 26	AC8	A	759	765	Right-handed alpha
Helix 27	AC9	A	766	769	Right-handed 310
Helix 28	AD1	A	770	772	Right-handed 310
Helix 29	AD2	A	773	787	Right-handed alpha
Helix 30	AD3	A	797	807	Right-handed alpha
Helix 31	AD4	A	816	827	Right-handed alpha
Helix 32	AD5	A	830	834	Right-handed 310
Helix 33	AD6	A	836	851	Right-handed alpha
Helix 34	AD7	A	870	872	Right-handed 310
Helix 35	AD8	A	914	930	Right-handed alpha
Helix 36	AD9	A	946	949	Right-handed 310
Helix 37	AE1	A	962	967	Right-handed alpha
Helix 38	AE2	A	975	996	Right-handed alpha
Helix 39	AE3	A	1004	1006	Right-handed 310
Helix 40	AE4	A	1020	1024	Right-handed 310
Helix 41	AE5	A	1043	1047	Right-handed 310
Helix 42	AE6	A	1048	1054	Right-handed alpha
Helix 43	AE7	A	1060	1075	Right-handed alpha
Helix 44	AE8	A	1082	1091	Right-handed alpha
Helix 45	AE9	A	1095	1097	Right-handed 310
Helix 46	AF1	A	1098	1109	Right-handed alpha
Helix 47	AF2	A	1120	1129	Right-handed alpha
Helix 48	AF3	A	1130	1132	Right-handed 310
Helix 49	AF4	A	1134	1138	Right-handed 310
Helix 50	AF5	A	1140	1153	Right-handed alpha
Helix 51	AF6	B	57	69	Right-handed alpha
Helix 52	AF7	B	74	76	Right-handed 310
Helix 53	AF8	B	151	168	Right-handed alpha
Helix 54	AF9	B	178	205	Right-handed alpha
Helix 55	AG1	B	207	211	Right-handed 310
Helix 56	AG2	B	216	221	Right-handed 310
Helix 57	AG3	B	222	231	Right-handed alpha
Helix 58	AG4	B	233	254	Right-handed alpha
Helix 59	AG5	B	254	260	Right-handed alpha
Helix 60	AG6	B	262	278	Right-handed alpha
Helix 61	AG7	B	398	417	Right-handed alpha
Helix 62	AG8	B	424	428	Right-handed 310
Helix 63	AG9	B	429	439	Right-handed alpha
Helix 64	AH1	B	445	457	Right-handed alpha
Helix 65	AH2	B	517	525	Right-handed alpha
Helix 66	AH3	B	526	528	Right-handed 310
Helix 67	AH4	B	557	562	Right-handed alpha
Helix 68	AH5	B	578	580	Right-handed 310
Helix 69	AH6	B	625	629	Right-handed 310
Helix 70	AH7	B	630	644	Right-handed alpha
Helix 71	AH8	B	673	681	Right-handed alpha
Helix 72	AH9	B	682	685	Right-handed 310
Helix 73	AI1	B	686	707	Right-handed alpha
Helix 74	AI2	B	715	717	Right-handed 310
Helix 75	AI3	B	742	746	Right-handed 310
Helix 76	AI4	B	759	765	Right-handed alpha
Helix 77	AI5	B	766	769	Right-handed 310
Helix 78	AI6	B	770	772	Right-handed 310
Helix 79	AI7	B	773	787	Right-handed alpha
Helix 80	AI8	B	797	807	Right-handed alpha
Helix 81	AI9	B	816	827	Right-handed alpha
Helix 82	AJ1	B	830	834	Right-handed 310
Helix 83	AJ2	B	836	851	Right-handed alpha
Helix 84	AJ3	B	870	872	Right-handed 310
Helix 85	AJ4	B	914	930	Right-handed alpha
Helix 86	AJ5	B	946	949	Right-handed 310
Helix 87	AJ6	B	962	967	Right-handed alpha
Helix 88	AJ7	B	975	996	Right-handed alpha
Helix 89	AJ8	B	1004	1006	Right-handed 310
Helix 90	AJ9	B	1020	1024	Right-handed 310
Helix 91	AK1	B	1043	1047	Right-handed 310
Helix 92	AK2	B	1048	1054	Right-handed alpha
Helix 93	AK3	B	1060	1075	Right-handed alpha
Helix 94	AK4	B	1082	1091	Right-handed alpha
Helix 95	AK5	B	1095	1097	Right-handed 310
Helix 96	AK6	B	1098	1109	Right-handed alpha
Helix 97	AK7	B	1120	1129	Right-handed alpha
Helix 98	AK8	B	1130	1132	Right-handed 310
Helix 99	AK9	B	1134	1138	Right-handed 310
Helix 100	AL1	B	1140	1153	Right-handed alpha
Helix 101	AL2	C	255	259	Right-handed 310
Helix 102	AL3	C	263	267	Right-handed 310
Helix 103	AL4	D	255	259	Right-handed 310
Helix 104	AL5	D	263	267	Right-handed 310

There are 29 sheets in PDB entry 8EWY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	50	first strand
Strand 2	A	36	39	anti-parallel
Strand 3	A	104	109	parallel
Strand 4	A	78	82	anti-parallel
Strand 5	A	87	88	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	56	first strand
Strand 2	A	94	95	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	128	first strand
Strand 2	A	555	556	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	288	first strand
Strand 2	A	312	317	anti-parallel
Strand 3	A	321	326	anti-parallel
Strand 4	A	364	367	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	302	303	first strand
Strand 2	A	291	295	anti-parallel
Strand 3	A	391	395	anti-parallel
Strand 4	A	381	386	anti-parallel
Strand 5	A	372	378	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	467	first strand
Strand 2	A	474	480	anti-parallel
Strand 3	A	495	502	anti-parallel
Strand 4	A	505	508	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	537	first strand
Strand 2	A	529	532	anti-parallel
Strand 3	C	287	289	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	572	574	first strand
Strand 2	B	572	574	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	576	577	first strand
Strand 2	A	652	657	parallel
Strand 3	A	662	666	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	582	591	first strand
Strand 2	A	594	601	anti-parallel
Strand 3	A	616	623	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	719	723	first strand
Strand 2	A	733	736	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	868	869	first strand
Strand 2	A	942	944	parallel
Strand 3	A	951	955	anti-parallel
Strand 4	A	902	909	anti-parallel
Strand 5	A	886	893	anti-parallel
Strand 6	A	874	882	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	998	999	first strand
Strand 2	A	1025	1026	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1008	1012	first strand
Strand 2	A	1015	1018	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1034	1035	first strand
Strand 2	A	1056	1057	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	50	first strand
Strand 2	B	36	39	anti-parallel
Strand 3	B	104	109	parallel
Strand 4	B	78	82	anti-parallel
Strand 5	B	87	88	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	56	first strand
Strand 2	B	94	95	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	128	first strand
Strand 2	B	555	556	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	284	288	first strand
Strand 2	B	312	317	anti-parallel
Strand 3	B	321	326	anti-parallel
Strand 4	B	364	367	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	302	303	first strand
Strand 2	B	291	295	anti-parallel
Strand 3	B	391	395	anti-parallel
Strand 4	B	381	386	anti-parallel
Strand 5	B	372	378	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	467	first strand
Strand 2	B	474	480	anti-parallel
Strand 3	B	495	502	anti-parallel
Strand 4	B	505	508	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	535	537	first strand
Strand 2	B	529	532	anti-parallel
Strand 3	D	287	289	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	576	577	first strand
Strand 2	B	652	657	parallel
Strand 3	B	662	666	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	582	591	first strand
Strand 2	B	594	601	anti-parallel
Strand 3	B	616	623	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	719	723	first strand
Strand 2	B	733	736	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	868	869	first strand
Strand 2	B	942	944	parallel
Strand 3	B	951	955	anti-parallel
Strand 4	B	902	909	anti-parallel
Strand 5	B	886	893	anti-parallel
Strand 6	B	874	882	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	998	999	first strand
Strand 2	B	1025	1026	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1008	1012	first strand
Strand 2	B	1015	1018	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1034	1035	first strand
Strand 2	B	1056	1057	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8EWY

Analysis of interatomic Contacts of Structural Units in PDB entry:
8EWY