Analysis of interatomic Contacts of Structural Units in PDB entry:
8EX5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EX5 entry

There is 1 chain in PDB entry 8EX5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 99GLN 539
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8EX5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 134Right-handed alpha
Helix 2
AA2
A
136 165Right-handed alpha
Helix 3
AA3
A
167 186Right-handed alpha
Helix 4
AA4
A
193 222Right-handed alpha
Helix 5
AA5
A
223 256Right-handed alpha
Helix 6
AA6
A
265 281Right-handed alpha
Helix 7
AA7
A
302 312Right-handed alpha
Helix 8
AA8
A
312 348Right-handed alpha
Helix 9
AA9
A
361 392Right-handed alpha
Helix 10
AB1
A
394 417Right-handed alpha
Helix 11
AB2
A
427 438Right-handed alpha
Helix 12
AB3
A
440 450Right-handed alpha
Helix 13
AB4
A
452 454Right-handed 310
Helix 14
AB5
A
455 470Right-handed alpha
Helix 15
AB6
A
474 488Right-handed alpha
Helix 16
AB7
A
493 538Right-handed alpha
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There are no sheets in PDB entry 8EX5
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il