Analysis of interatomic Contacts of Structural Units in PDB entry:
8EX8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8EX8 entry

There is 1 chain in PDB entry 8EX8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 99GLN 539
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8EX8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
99 121Right-handed alpha
Helix 2
AA2
A
122 124Right-handed 310
Helix 3
AA3
A
125 134Right-handed alpha
Helix 4
AA4
A
136 160Right-handed alpha
Helix 5
AA5
A
166 186Right-handed alpha
Helix 6
AA6
A
193 221Right-handed alpha
Helix 7
AA7
A
223 256Right-handed alpha
Helix 8
AA8
A
258 263Right-handed 310
Helix 9
AA9
A
264 280Right-handed alpha
Helix 10
AB1
A
302 311Right-handed alpha
Helix 11
AB2
A
314 347Right-handed alpha
Helix 12
AB3
A
361 390Right-handed alpha
Helix 13
AB4
A
394 422Right-handed alpha
Helix 14
AB5
A
426 437Right-handed alpha
Helix 15
AB6
A
439 451Right-handed alpha
Helix 16
AB7
A
452 454Right-handed 310
Helix 17
AB8
A
455 470Right-handed alpha
Helix 18
AB9
A
474 490Right-handed alpha
Helix 19
AC1
A
493 506Right-handed alpha
Helix 20
AC2
A
506 539Right-handed alpha
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There are no sheets in PDB entry 8EX8
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il