Analysis of interatomic Contacts of Structural Units in PDB entry:
8F0G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8F0G entry

There are 5 chains in PDB entry 8F0G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
X	GLN 3	GLY 119
Y	ALA 2	ILE 107
A	PRO 26	TYR 1138
B	GLN 271	TYR 1138
C	PRO 272	ASP 1139

There are 52 helices in PDB entry 8F0G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	X	101	105	Right-handed 310
Helix 2	AA2	A	294	304	Right-handed alpha
Helix 3	AA3	A	337	342	Right-handed alpha
Helix 4	AA4	A	619	624	Right-handed alpha
Helix 5	AA5	A	630	636	Right-handed alpha
Helix 6	AA6	A	737	743	Right-handed alpha
Helix 7	AA7	A	746	755	Right-handed alpha
Helix 8	AA8	A	758	783	Right-handed alpha
Helix 9	AA9	A	816	825	Right-handed alpha
Helix 10	AB1	A	852	856	Right-handed 310
Helix 11	AB2	A	866	884	Right-handed alpha
Helix 12	AB3	A	897	906	Right-handed alpha
Helix 13	AB4	A	907	910	Right-handed 310
Helix 14	AB5	A	912	919	Right-handed alpha
Helix 15	AB6	A	919	940	Right-handed alpha
Helix 16	AB7	A	945	965	Right-handed alpha
Helix 17	AB8	A	966	968	Right-handed 310
Helix 18	AB9	A	976	984	Right-handed alpha
Helix 19	AC1	A	985	1033	Right-handed alpha
Helix 20	AC2	B	294	304	Right-handed alpha
Helix 21	AC3	B	737	743	Right-handed alpha
Helix 22	AC4	B	746	757	Right-handed alpha
Helix 23	AC5	B	758	782	Right-handed alpha
Helix 24	AC6	B	816	826	Right-handed alpha
Helix 25	AC7	B	866	883	Right-handed alpha
Helix 26	AC8	B	886	890	Right-handed 310
Helix 27	AC9	B	897	910	Right-handed alpha
Helix 28	AD1	B	913	919	Right-handed alpha
Helix 29	AD2	B	919	941	Right-handed alpha
Helix 30	AD3	B	945	965	Right-handed alpha
Helix 31	AD4	B	976	984	Right-handed alpha
Helix 32	AD5	B	985	1033	Right-handed alpha
Helix 33	AD6	C	294	304	Right-handed alpha
Helix 34	AD7	C	338	343	Right-handed alpha
Helix 35	AD8	C	351	353	Right-handed 310
Helix 36	AD9	C	364	369	Right-handed 310
Helix 37	AE1	C	405	411	Right-handed 310
Helix 38	AE2	C	416	422	Right-handed alpha
Helix 39	AE3	C	737	743	Right-handed alpha
Helix 40	AE4	C	746	757	Right-handed alpha
Helix 41	AE5	C	758	782	Right-handed alpha
Helix 42	AE6	C	816	827	Right-handed alpha
Helix 43	AE7	C	851	856	Right-handed 310
Helix 44	AE8	C	866	884	Right-handed alpha
Helix 45	AE9	C	887	891	Right-handed 310
Helix 46	AF1	C	897	909	Right-handed alpha
Helix 47	AF2	C	912	919	Right-handed alpha
Helix 48	AF3	C	919	940	Right-handed alpha
Helix 49	AF4	C	945	965	Right-handed alpha
Helix 50	AF5	C	966	968	Right-handed 310
Helix 51	AF6	C	976	984	Right-handed alpha
Helix 52	AF7	C	985	1032	Right-handed alpha

There are 41 sheets in PDB entry 8F0G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	19	20	first strand
Strand 2	X	81	82	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	59	60	first strand
Strand 2	X	46	50	anti-parallel
Strand 3	X	35	39	anti-parallel
Strand 4	X	93	97	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	5	7	first strand
Strand 2	Y	24	26	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	20	22	first strand
Strand 2	Y	73	76	anti-parallel
Strand 3	Y	63	66	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	45	49	first strand
Strand 2	Y	34	39	anti-parallel
Strand 3	Y	86	91	anti-parallel
Strand 4	Y	103	104	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	30	first strand
Strand 2	A	61	66	anti-parallel
Strand 3	A	264	269	anti-parallel
Strand 4	A	90	93	anti-parallel
Strand 5	A	189	196	anti-parallel
Strand 6	A	201	208	anti-parallel
Strand 7	A	224	229	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	242	anti-parallel
Strand 3	A	101	107	anti-parallel
Strand 4	A	116	118	anti-parallel
Strand 5	A	126	131	anti-parallel
Strand 6	A	169	172	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	316	first strand
Strand 2	A	594	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	642	644	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	328	first strand
Strand 2	A	538	543	parallel
Strand 3	A	548	554	anti-parallel
Strand 4	A	584	588	anti-parallel
Strand 5	A	575	577	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	358	first strand
Strand 2	A	395	397	anti-parallel
Strand 3	A	513	514	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	391	392	first strand
Strand 2	A	524	525	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	692	696	parallel
Strand 3	A	670	674	anti-parallel
Strand 4	A	664	667	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	712	722	first strand
Strand 2	A	1059	1077	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	725	727	first strand
Strand 2	A	1059	1077	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1103	1105	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	733	736	first strand
Strand 2	A	858	861	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	788	790	first strand
Strand 2	C	702	704	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1086	1087	first strand
Strand 2	A	1081	1083	anti-parallel
Strand 3	A	1133	1134	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	279	first strand
Strand 2	B	285	290	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	314	first strand
Strand 2	B	596	599	anti-parallel
Strand 3	B	609	611	anti-parallel
Strand 4	B	649	651	anti-parallel
Strand 5	B	642	644	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	326	328	first strand
Strand 2	B	541	543	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	575	577	first strand
Strand 2	B	584	586	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	660	first strand
Strand 2	B	693	697	parallel
Strand 3	B	670	673	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	701	703	first strand
Strand 2	C	787	789	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	712	728	first strand
Strand 2	B	1059	1077	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	712	728	first strand
Strand 2	B	1059	1077	anti-parallel
Strand 3	B	1094	1097	anti-parallel
Strand 4	B	1102	1105	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	735	736	first strand
Strand 2	B	858	859	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1125	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	278	279	first strand
Strand 2	C	285	287	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	348	349	first strand
Strand 2	C	394	403	parallel
Strand 3	C	354	358	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	348	349	first strand
Strand 2	C	394	403	parallel
Strand 3	C	507	516	anti-parallel
Strand 4	C	431	437	anti-parallel
Strand 5	C	376	380	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	362	first strand
Strand 2	C	524	525	parallel
Strand 3	C	391	392	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	474	first strand
Strand 2	C	488	489	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	543	first strand
Strand 2	C	546	553	anti-parallel
Strand 3	C	584	588	anti-parallel
Strand 4	C	573	577	anti-parallel
Strand 5	C	565	567	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	660	first strand
Strand 2	C	692	697	parallel
Strand 3	C	670	674	anti-parallel
Strand 4	C	664	665	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	712	713	first strand
Strand 2	C	1074	1077	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel
Strand 5	C	1113	1114	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	717	728	first strand
Strand 2	C	1059	1070	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	736	first strand
Strand 2	C	858	861	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1122	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8F0G

Analysis of interatomic Contacts of Structural Units in PDB entry:
8F0G