Analysis of interatomic Contacts of Structural Units in PDB entry:
8F0O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8F0O entry

There are 4 chains in PDB entry 8F0O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 34	VAL 839
B	HIS 34	VAL 839
C	HIS 34	VAL 839
D	HIS 34	VAL 839

There are110 helices in PDB entry 8F0O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	67	Right-handed alpha
Helix 2	AA2	A	87	102	Right-handed alpha
Helix 3	AA3	A	112	125	Right-handed alpha
Helix 4	AA4	A	152	168	Right-handed alpha
Helix 5	AA5	A	180	185	Right-handed alpha
Helix 6	AA6	A	185	190	Right-handed alpha
Helix 7	AA7	A	210	220	Right-handed alpha
Helix 8	AA8	A	231	245	Right-handed alpha
Helix 9	AA9	A	260	264	Right-handed 310
Helix 10	AB1	A	286	300	Right-handed alpha
Helix 11	AB2	A	317	336	Right-handed alpha
Helix 12	AB3	A	355	365	Right-handed alpha
Helix 13	AB4	A	423	427	Right-handed 310
Helix 14	AB5	A	454	458	Right-handed 310
Helix 15	AB6	A	461	475	Right-handed alpha
Helix 16	AB7	A	499	507	Right-handed alpha
Helix 17	AB8	A	520	525	Right-handed alpha
Helix 18	AB9	A	560	581	Right-handed alpha
Helix 19	AC1	A	632	664	Right-handed alpha
Helix 20	AC2	A	670	677	Right-handed alpha
Helix 21	AC3	A	688	697	Right-handed alpha
Helix 22	AC4	A	699	712	Right-handed alpha
Helix 23	AC5	A	720	730	Right-handed alpha
Helix 24	AC6	A	739	749	Right-handed alpha
Helix 25	AC7	A	772	789	Right-handed alpha
Helix 26	AC8	A	789	799	Right-handed alpha
Helix 27	AC9	A	822	839	Right-handed alpha
Helix 28	AD1	B	51	66	Right-handed alpha
Helix 29	AD2	B	87	101	Right-handed alpha
Helix 30	AD3	B	112	126	Right-handed alpha
Helix 31	AD4	B	152	167	Right-handed alpha
Helix 32	AD5	B	180	185	Right-handed alpha
Helix 33	AD6	B	185	195	Right-handed alpha
Helix 34	AD7	B	207	209	Right-handed 310
Helix 35	AD8	B	210	220	Right-handed alpha
Helix 36	AD9	B	231	245	Right-handed alpha
Helix 37	AE1	B	260	264	Right-handed 310
Helix 38	AE2	B	266	270	Right-handed 310
Helix 39	AE3	B	286	302	Right-handed alpha
Helix 40	AE4	B	317	334	Right-handed alpha
Helix 41	AE5	B	355	365	Right-handed alpha
Helix 42	AE6	B	454	457	Right-handed 310
Helix 43	AE7	B	461	475	Right-handed alpha
Helix 44	AE8	B	500	508	Right-handed alpha
Helix 45	AE9	B	521	526	Right-handed alpha
Helix 46	AF1	B	562	580	Right-handed alpha
Helix 47	AF2	B	632	665	Right-handed alpha
Helix 48	AF3	B	670	677	Right-handed alpha
Helix 49	AF4	B	691	696	Right-handed alpha
Helix 50	AF5	B	699	707	Right-handed alpha
Helix 51	AF6	B	720	730	Right-handed alpha
Helix 52	AF7	B	739	749	Right-handed alpha
Helix 53	AF8	B	775	780	Right-handed alpha
Helix 54	AF9	B	780	789	Right-handed alpha
Helix 55	AG1	B	789	796	Right-handed alpha
Helix 56	AG2	B	818	839	Right-handed alpha
Helix 57	AG3	C	51	67	Right-handed alpha
Helix 58	AG4	C	87	102	Right-handed alpha
Helix 59	AG5	C	111	125	Right-handed alpha
Helix 60	AG6	C	152	168	Right-handed alpha
Helix 61	AG7	C	178	184	Right-handed 310
Helix 62	AG8	C	185	195	Right-handed alpha
Helix 63	AG9	C	210	220	Right-handed alpha
Helix 64	AH1	C	221	223	Right-handed 310
Helix 65	AH2	C	231	245	Right-handed alpha
Helix 66	AH3	C	260	264	Right-handed 310
Helix 67	AH4	C	286	301	Right-handed alpha
Helix 68	AH5	C	317	336	Right-handed alpha
Helix 69	AH6	C	355	365	Right-handed alpha
Helix 70	AH7	C	455	457	Right-handed 310
Helix 71	AH8	C	461	474	Right-handed alpha
Helix 72	AH9	C	499	507	Right-handed alpha
Helix 73	AI1	C	520	525	Right-handed alpha
Helix 74	AI2	C	552	557	Right-handed alpha
Helix 75	AI3	C	560	578	Right-handed alpha
Helix 76	AI4	C	632	664	Right-handed alpha
Helix 77	AI5	C	669	676	Right-handed alpha
Helix 78	AI6	C	688	696	Right-handed alpha
Helix 79	AI7	C	699	712	Right-handed alpha
Helix 80	AI8	C	712	717	Right-handed alpha
Helix 81	AI9	C	720	729	Right-handed alpha
Helix 82	AJ1	C	738	747	Right-handed alpha
Helix 83	AJ2	C	774	788	Right-handed alpha
Helix 84	AJ3	C	789	797	Right-handed alpha
Helix 85	AJ4	C	818	839	Right-handed alpha
Helix 86	AJ5	D	51	67	Right-handed alpha
Helix 87	AJ6	D	87	101	Right-handed alpha
Helix 88	AJ7	D	111	126	Right-handed alpha
Helix 89	AJ8	D	152	168	Right-handed alpha
Helix 90	AJ9	D	180	185	Right-handed alpha
Helix 91	AK1	D	185	190	Right-handed alpha
Helix 92	AK2	D	211	220	Right-handed alpha
Helix 93	AK3	D	231	244	Right-handed alpha
Helix 94	AK4	D	286	301	Right-handed alpha
Helix 95	AK5	D	317	336	Right-handed alpha
Helix 96	AK6	D	356	365	Right-handed alpha
Helix 97	AK7	D	415	419	Right-handed 310
Helix 98	AK8	D	461	474	Right-handed alpha
Helix 99	AK9	D	500	507	Right-handed alpha
Helix 100	AL1	D	520	527	Right-handed alpha
Helix 101	AL2	D	563	581	Right-handed alpha
Helix 102	AL3	D	632	665	Right-handed alpha
Helix 103	AL4	D	670	677	Right-handed alpha
Helix 104	AL5	D	688	696	Right-handed alpha
Helix 105	AL6	D	701	712	Right-handed alpha
Helix 106	AL7	D	720	731	Right-handed alpha
Helix 107	AL8	D	739	749	Right-handed alpha
Helix 108	AL9	D	776	782	Right-handed alpha
Helix 109	AM1	D	790	796	Right-handed alpha
Helix 110	AM2	D	821	839	Right-handed alpha

There are 28 sheets in PDB entry 8F0O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	37	first strand
Strand 2	A	75	77	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	83	first strand
Strand 2	A	39	43	parallel
Strand 3	A	106	107	parallel
Strand 4	A	129	131	parallel
Strand 5	A	146	148	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	203	first strand
Strand 2	A	171	176	parallel
Strand 3	A	225	229	parallel
Strand 4	A	253	256	parallel
Strand 5	A	275	280	parallel
Strand 6	A	390	394	anti-parallel
Strand 7	A	399	405	anti-parallel
Strand 8	A	411	413	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	479	480	first strand
Strand 2	A	434	436	parallel
Strand 3	A	512	518	parallel
Strand 4	A	761	768	anti-parallel
Strand 5	A	534	543	anti-parallel
Strand 6	A	734	738	anti-parallel
Strand 7	A	682	683	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	529	first strand
Strand 2	A	761	768	anti-parallel
Strand 3	A	534	543	anti-parallel
Strand 4	A	752	755	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	38	first strand
Strand 2	B	75	78	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	43	first strand
Strand 2	B	81	83	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	107	first strand
Strand 2	B	129	131	parallel
Strand 3	B	146	151	parallel
Strand 4	B	383	384	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	203	first strand
Strand 2	B	171	176	parallel
Strand 3	B	225	229	parallel
Strand 4	B	253	256	parallel
Strand 5	B	275	280	parallel
Strand 6	B	389	395	anti-parallel
Strand 7	B	398	406	anti-parallel
Strand 8	B	410	413	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	370	first strand
Strand 2	B	373	375	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	432	433	first strand
Strand 2	B	477	478	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	446	first strand
Strand 2	B	459	460	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	682	683	first strand
Strand 2	B	734	738	parallel
Strand 3	B	538	543	anti-parallel
Strand 4	B	752	755	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	83	first strand
Strand 2	C	35	43	parallel
Strand 3	C	105	107	parallel
Strand 4	C	129	131	parallel
Strand 5	C	146	148	parallel

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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	203	first strand
Strand 2	C	171	176	parallel
Strand 3	C	225	229	parallel
Strand 4	C	253	256	parallel
Strand 5	C	275	280	parallel
Strand 6	C	389	395	anti-parallel
Strand 7	C	398	406	anti-parallel
Strand 8	C	410	413	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	368	370	first strand
Strand 2	C	373	375	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	433	435	first strand
Strand 2	C	478	480	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	446	first strand
Strand 2	C	459	460	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	513	519	first strand
Strand 2	C	763	768	anti-parallel
Strand 3	C	528	529	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	513	519	first strand
Strand 2	C	763	768	anti-parallel
Strand 3	C	534	535	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	540	543	first strand
Strand 2	C	752	755	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	682	683	first strand
Strand 2	C	734	735	parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	83	first strand
Strand 2	D	35	43	parallel
Strand 3	D	105	107	parallel
Strand 4	D	129	131	parallel
Strand 5	D	146	151	parallel
Strand 6	D	383	384	parallel

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There are 8 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	203	first strand
Strand 2	D	171	176	parallel
Strand 3	D	225	229	parallel
Strand 4	D	253	256	parallel
Strand 5	D	275	280	parallel
Strand 6	D	389	394	anti-parallel
Strand 7	D	399	406	anti-parallel
Strand 8	D	410	413	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	368	370	first strand
Strand 2	D	373	375	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	432	437	first strand
Strand 2	D	477	482	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	513	517	first strand
Strand 2	D	765	767	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	681	683	first strand
Strand 2	D	733	738	parallel
Strand 3	D	538	543	anti-parallel
Strand 4	D	752	755	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8F0O

Analysis of interatomic Contacts of Structural Units in PDB entry:
8F0O