Analysis of interatomic Contacts of Structural Units in PDB entry:
8F0R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8F0R entry

There is 1 chain in PDB entry 8F0R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 129TRP 1437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 8F0R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
129 139Right-handed alpha
Helix 2
AA2
A
139 159Right-handed alpha
Helix 3
AA3
A
162 187Right-handed alpha
Helix 4
AA4
A
195 198Right-handed 310
Helix 5
AA5
A
199 218Right-handed alpha
Helix 6
AA6
A
226 240Right-handed 310
Helix 7
AA7
A
243 258Right-handed alpha
Helix 8
AA8
A
258 281Right-handed alpha
Helix 9
AA9
A
282 286Right-handed 310
Helix 10
AB1
A
302 312Right-handed alpha
Helix 11
AB2
A
313 316Right-handed 310
Helix 12
AB3
A
360 374Right-handed alpha
Helix 13
AB4
A
376 389Right-handed alpha
Helix 14
AB5
A
392 404Right-handed alpha
Helix 15
AB6
A
406 430Right-handed alpha
Helix 16
AB7
A
518 538Right-handed alpha
Helix 17
AB8
A
544 573Right-handed alpha
Helix 18
AB9
A
574 581Right-handed alpha
Helix 19
AC1
A
581 600Right-handed alpha
Helix 20
AC2
A
609 612Right-handed 310
Helix 21
AC3
A
613 619Right-handed alpha
Helix 22
AC4
A
619 624Right-handed alpha
Helix 23
AC5
A
624 637Right-handed alpha
Helix 24
AC6
A
637 670Right-handed alpha
Helix 25
AC7
A
671 674Right-handed 310
Helix 26
AC8
A
686 700Right-handed alpha
Helix 27
AC9
A
702 713Right-handed alpha
Helix 28
AD1
A
716 731Right-handed alpha
Helix 29
AD2
A
731 744Right-handed alpha
Helix 30
AD3
A
843 854Right-handed alpha
Helix 31
AD4
A
855 874Right-handed alpha
Helix 32
AD5
A
879 882Right-handed 310
Helix 33
AD6
A
883 913Right-handed alpha
Helix 34
AD7
A
913 919Right-handed alpha
Helix 35
AD8
A
920 943Right-handed alpha
Helix 36
AD9
A
947 953Right-handed alpha
Helix 37
AE1
A
954 957Right-handed 310
Helix 38
AE2
A
958 964Right-handed alpha
Helix 39
AE3
A
968 1005Right-handed alpha
Helix 40
AE4
A
1026 1033Right-handed alpha
Helix 41
AE5
A
1046 1060Right-handed alpha
Helix 42
AE6
A
1062 1072Right-handed alpha
Helix 43
AE7
A
1085 1087Right-handed 310
Helix 44
AE8
A
1088 1100Right-handed alpha
Helix 45
AE9
A
1105 1123Right-handed alpha
Helix 46
AF1
A
1130 1145Right-handed alpha
Helix 47
AF2
A
1158 1169Right-handed alpha
Helix 48
AF3
A
1169 1190Right-handed alpha
Helix 49
AF4
A
1195 1225Right-handed alpha
Helix 50
AF5
A
1226 1230Right-handed 310
Helix 51
AF6
A
1231 1257Right-handed alpha
Helix 52
AF7
A
1261 1268Right-handed alpha
Helix 53
AF8
A
1271 1276Right-handed alpha
Helix 54
AF9
A
1277 1280Right-handed 310
Helix 55
AG1
A
1283 1321Right-handed alpha
Helix 56
AG2
A
1338 1350Right-handed alpha
Helix 57
AG3
A
1354 1363Right-handed alpha
Helix 58
AG4
A
1383 1399Right-handed alpha
Helix 59
AG5
A
1401 1423Right-handed alpha
Helix 60
AG6
A
1426 1437Right-handed alpha
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There are 2 sheets in PDB entry 8F0R. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 290first strand
Strand 2
A
341 344anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1009 1012first strand
Strand 2
A
1036 1039anti-parallel
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