Analysis of interatomic Contacts of Structural Units in PDB entry:
8F0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8F0S entry

There are 2 chains in PDB entry 8F0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 129TRP 1437
B
 CYS 13VAL 57
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 8F0S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
129 138Right-handed alpha
Helix 2
AA2
A
139 159Right-handed alpha
Helix 3
AA3
A
162 188Right-handed alpha
Helix 4
AA4
A
195 198Right-handed 310
Helix 5
AA5
A
199 218Right-handed alpha
Helix 6
AA6
A
224 241Right-handed 310
Helix 7
AA7
A
243 258Right-handed alpha
Helix 8
AA8
A
258 280Right-handed alpha
Helix 9
AA9
A
282 286Right-handed 310
Helix 10
AB1
A
302 312Right-handed alpha
Helix 11
AB2
A
313 316Right-handed 310
Helix 12
AB3
A
350 355Right-handed alpha
Helix 13
AB4
A
360 374Right-handed alpha
Helix 14
AB5
A
376 389Right-handed alpha
Helix 15
AB6
A
392 404Right-handed alpha
Helix 16
AB7
A
406 430Right-handed alpha
Helix 17
AB8
A
518 539Right-handed alpha
Helix 18
AB9
A
545 573Right-handed alpha
Helix 19
AC1
A
574 579Right-handed alpha
Helix 20
AC2
A
581 600Right-handed alpha
Helix 21
AC3
A
611 613Right-handed 310
Helix 22
AC4
A
614 619Right-handed alpha
Helix 23
AC5
A
620 623Right-handed 310
Helix 24
AC6
A
624 637Right-handed alpha
Helix 25
AC7
A
637 664Right-handed alpha
Helix 26
AC8
A
665 670Right-handed alpha
Helix 27
AC9
A
671 674Right-handed 310
Helix 28
AD1
A
686 700Right-handed alpha
Helix 29
AD2
A
702 713Right-handed alpha
Helix 30
AD3
A
716 730Right-handed alpha
Helix 31
AD4
A
731 744Right-handed alpha
Helix 32
AD5
A
843 855Right-handed alpha
Helix 33
AD6
A
855 874Right-handed alpha
Helix 34
AD7
A
879 882Right-handed 310
Helix 35
AD8
A
883 913Right-handed alpha
Helix 36
AD9
A
913 918Right-handed alpha
Helix 37
AE1
A
920 943Right-handed alpha
Helix 38
AE2
A
947 952Right-handed alpha
Helix 39
AE3
A
953 957Right-handed 310
Helix 40
AE4
A
958 964Right-handed alpha
Helix 41
AE5
A
967 1005Right-handed alpha
Helix 42
AE6
A
1026 1033Right-handed alpha
Helix 43
AE7
A
1046 1060Right-handed alpha
Helix 44
AE8
A
1062 1072Right-handed alpha
Helix 45
AE9
A
1085 1087Right-handed 310
Helix 46
AF1
A
1088 1100Right-handed alpha
Helix 47
AF2
A
1105 1123Right-handed alpha
Helix 48
AF3
A
1130 1145Right-handed alpha
Helix 49
AF4
A
1158 1169Right-handed alpha
Helix 50
AF5
A
1169 1190Right-handed alpha
Helix 51
AF6
A
1195 1225Right-handed alpha
Helix 52
AF7
A
1226 1230Right-handed 310
Helix 53
AF8
A
1231 1257Right-handed alpha
Helix 54
AF9
A
1261 1268Right-handed alpha
Helix 55
AG1
A
1269 1280Right-handed 310
Helix 56
AG2
A
1283 1295Right-handed alpha
Helix 57
AG3
A
1295 1321Right-handed alpha
Helix 58
AG4
A
1338 1350Right-handed alpha
Helix 59
AG5
A
1354 1364Right-handed alpha
Helix 60
AG6
A
1383 1398Right-handed alpha
Helix 61
AG7
A
1401 1424Right-handed alpha
Helix 62
AG8
A
1426 1437Right-handed alpha
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There are 4 sheets in PDB entry 8F0S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 290first strand
Strand 2
A
341 344anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 544first strand
Strand 2
B
34 44anti-parallel
Strand 3
B
28 31anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 544first strand
Strand 2
B
34 44anti-parallel
Strand 3
B
50 56anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1009 1012first strand
Strand 2
A
1036 1039anti-parallel
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