Analysis of interatomic Contacts of Structural Units in PDB entry:
8F0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8F0X entry

There are 3 chains in PDB entry 8F0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 1003
B
 SER 17GLY 99
C
 LYS 37SER 126
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 8F0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 12Right-handed alpha
Helix 2
AA2
A
14 46Right-handed alpha
Helix 3
AA3
A
50 69Right-handed alpha
Helix 4
AA4
A
83 100Right-handed alpha
Helix 5
AA5
A
104 123Right-handed alpha
Helix 6
AA6
A
129 140Right-handed alpha
Helix 7
AA7
A
143 158Right-handed alpha
Helix 8
AA8
A
159 164Right-handed alpha
Helix 9
AA9
A
167 182Right-handed alpha
Helix 10
AB1
A
186 206Right-handed alpha
Helix 11
AB2
A
212 235Right-handed alpha
Helix 12
AB3
A
242 263Right-handed alpha
Helix 13
AB4
A
265 269Right-handed 310
Helix 14
AB5
A
270 292Right-handed alpha
Helix 15
AB6
A
303 321Right-handed alpha
Helix 16
AB7
A
327 342Right-handed alpha
Helix 17
AB8
A
345 355Right-handed alpha
Helix 18
AB9
A
355 364Right-handed alpha
Helix 19
AC1
A
371 383Right-handed alpha
Helix 20
AC2
A
384 403Right-handed alpha
Helix 21
AC3
A
405 421Right-handed alpha
Helix 22
AC4
A
428 448Right-handed alpha
Helix 23
AC5
A
452 470Right-handed alpha
Helix 24
AC6
A
476 494Right-handed alpha
Helix 25
AC7
A
497 515Right-handed alpha
Helix 26
AC8
A
516 542Right-handed alpha
Helix 27
AC9
A
547 562Right-handed alpha
Helix 28
AD1
A
570 588Right-handed alpha
Helix 29
AD2
A
591 605Right-handed alpha
Helix 30
AD3
A
610 632Right-handed alpha
Helix 31
AD4
A
633 636Right-handed 310
Helix 32
AD5
A
640 656Right-handed alpha
Helix 33
AD6
A
664 682Right-handed alpha
Helix 34
AD7
A
684 702Right-handed alpha
Helix 35
AD8
A
703 708Right-handed alpha
Helix 36
AD9
A
710 723Right-handed alpha
Helix 37
AE1
A
733 745Right-handed alpha
Helix 38
AE2
A
745 750Right-handed alpha
Helix 39
AE3
A
752 767Right-handed alpha
Helix 40
AE4
A
769 787Right-handed alpha
Helix 41
AE5
A
787 798Right-handed alpha
Helix 42
AE6
A
805 817Right-handed alpha
Helix 43
AE7
A
818 820Right-handed 310
Helix 44
AE8
A
822 840Right-handed alpha
Helix 45
AE9
A
841 846Right-handed alpha
Helix 46
AF1
A
863 867Right-handed 310
Helix 47
AF2
A
879 895Right-handed alpha
Helix 48
AF3
A
964 978Right-handed alpha
Helix 49
AF4
A
980 982Right-handed 310
Helix 50
AF5
A
983 991Right-handed alpha
Helix 51
AF6
A
992 1000Right-handed alpha
Helix 52
AF7
B
18 23Right-handed alpha
Helix 53
AF8
B
27 38Right-handed alpha
Helix 54
AF9
B
46 74Right-handed alpha
Helix 55
AG1
B
80 91Right-handed alpha
Helix 56
AG2
B
91 99Right-handed alpha
Helix 57
AG3
C
40 52Right-handed alpha
Helix 58
AG4
C
58 86Right-handed alpha
Helix 59
AG5
C
87 89Right-handed 310
Helix 60
AG6
C
93 105Right-handed alpha
Helix 61
AG7
C
107 124Right-handed alpha
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There are 4 sheets in PDB entry 8F0X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
799 800first strand
Strand 2
A
803 804anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
848 854first strand
Strand 2
A
873 878anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 44first strand
Strand 2
C
91 92parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 79first strand
Strand 2
C
56 57parallel
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