Analysis of interatomic Contacts of Structural Units in PDB entry:
8F1C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8F1C entry

There are 4 chains in PDB entry 8F1C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 7PRO 463
B
 SER 7PRO 463
C
 SER 7PRO 463
D
 SER 7PRO 463
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 92 helices in PDB entry 8F1C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 27Right-handed alpha
Helix 2
AA2
A
32 39Right-handed alpha
Helix 3
AA3
A
60 74Right-handed alpha
Helix 4
AA4
A
83 94Right-handed alpha
Helix 5
AA5
A
97 101Right-handed 310
Helix 6
AA6
A
102 104Right-handed 310
Helix 7
AA7
A
105 110Right-handed alpha
Helix 8
AA8
A
111 121Right-handed alpha
Helix 9
AA9
A
172 180Right-handed alpha
Helix 10
AB1
A
188 211Right-handed alpha
Helix 11
AB2
A
243 266Right-handed alpha
Helix 12
AB3
A
269 276Right-handed alpha
Helix 13
AB4
A
278 285Right-handed alpha
Helix 14
AB5
A
286 294Right-handed alpha
Helix 15
AB6
A
299 311Right-handed alpha
Helix 16
AB7
A
312 320Right-handed 310
Helix 17
AB8
A
321 326Right-handed alpha
Helix 18
AB9
A
328 341Right-handed alpha
Helix 19
AC1
A
341 367Right-handed alpha
Helix 20
AC2
A
377 381Right-handed 310
Helix 21
AC3
A
387 399Right-handed alpha
Helix 22
AC4
A
410 430Right-handed alpha
Helix 23
AC5
A
431 452Right-handed alpha
Helix 24
AC6
B
22 27Right-handed alpha
Helix 25
AC7
B
32 39Right-handed alpha
Helix 26
AC8
B
60 74Right-handed alpha
Helix 27
AC9
B
83 94Right-handed alpha
Helix 28
AD1
B
97 101Right-handed 310
Helix 29
AD2
B
102 104Right-handed 310
Helix 30
AD3
B
105 110Right-handed alpha
Helix 31
AD4
B
111 121Right-handed alpha
Helix 32
AD5
B
172 180Right-handed alpha
Helix 33
AD6
B
188 211Right-handed alpha
Helix 34
AD7
B
243 266Right-handed alpha
Helix 35
AD8
B
269 276Right-handed alpha
Helix 36
AD9
B
278 285Right-handed alpha
Helix 37
AE1
B
286 294Right-handed alpha
Helix 38
AE2
B
299 311Right-handed alpha
Helix 39
AE3
B
312 320Right-handed 310
Helix 40
AE4
B
321 326Right-handed alpha
Helix 41
AE5
B
328 341Right-handed alpha
Helix 42
AE6
B
341 367Right-handed alpha
Helix 43
AE7
B
377 381Right-handed 310
Helix 44
AE8
B
387 399Right-handed alpha
Helix 45
AE9
B
410 430Right-handed alpha
Helix 46
AF1
B
431 452Right-handed alpha
Helix 47
AF2
C
22 27Right-handed alpha
Helix 48
AF3
C
32 39Right-handed alpha
Helix 49
AF4
C
60 74Right-handed alpha
Helix 50
AF5
C
83 94Right-handed alpha
Helix 51
AF6
C
97 101Right-handed 310
Helix 52
AF7
C
102 104Right-handed 310
Helix 53
AF8
C
105 110Right-handed alpha
Helix 54
AF9
C
111 121Right-handed alpha
Helix 55
AG1
C
172 180Right-handed alpha
Helix 56
AG2
C
188 211Right-handed alpha
Helix 57
AG3
C
243 266Right-handed alpha
Helix 58
AG4
C
269 276Right-handed alpha
Helix 59
AG5
C
278 285Right-handed alpha
Helix 60
AG6
C
286 294Right-handed alpha
Helix 61
AG7
C
299 311Right-handed alpha
Helix 62
AG8
C
312 320Right-handed 310
Helix 63
AG9
C
321 326Right-handed alpha
Helix 64
AH1
C
328 341Right-handed alpha
Helix 65
AH2
C
341 367Right-handed alpha
Helix 66
AH3
C
377 381Right-handed 310
Helix 67
AH4
C
387 399Right-handed alpha
Helix 68
AH5
C
410 430Right-handed alpha
Helix 69
AH6
C
431 452Right-handed alpha
Helix 70
AH7
D
22 27Right-handed alpha
Helix 71
AH8
D
32 39Right-handed alpha
Helix 72
AH9
D
60 74Right-handed alpha
Helix 73
AI1
D
83 94Right-handed alpha
Helix 74
AI2
D
97 101Right-handed 310
Helix 75
AI3
D
102 104Right-handed 310
Helix 76
AI4
D
105 110Right-handed alpha
Helix 77
AI5
D
111 121Right-handed alpha
Helix 78
AI6
D
172 180Right-handed alpha
Helix 79
AI7
D
188 211Right-handed alpha
Helix 80
AI8
D
243 266Right-handed alpha
Helix 81
AI9
D
269 276Right-handed alpha
Helix 82
AJ1
D
278 285Right-handed alpha
Helix 83
AJ2
D
286 294Right-handed alpha
Helix 84
AJ3
D
299 311Right-handed alpha
Helix 85
AJ4
D
312 320Right-handed 310
Helix 86
AJ5
D
321 326Right-handed alpha
Helix 87
AJ6
D
328 341Right-handed alpha
Helix 88
AJ7
D
341 367Right-handed alpha
Helix 89
AJ8
D
377 381Right-handed 310
Helix 90
AJ9
D
387 399Right-handed alpha
Helix 91
AK1
D
410 430Right-handed alpha
Helix 92
AK2
D
431 452Right-handed alpha
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There are 4 sheets in PDB entry 8F1C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 21first strand
Strand 2
A
10 14anti-parallel
Strand 3
A
54 57parallel
Strand 4
A
48 49anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 21first strand
Strand 2
B
10 14anti-parallel
Strand 3
B
54 57parallel
Strand 4
B
48 49anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 21first strand
Strand 2
C
10 14anti-parallel
Strand 3
C
54 57parallel
Strand 4
C
48 49anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
17 21first strand
Strand 2
D
10 14anti-parallel
Strand 3
D
54 57parallel
Strand 4
D
48 49anti-parallel
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