Analysis of interatomic Contacts of Structural Units in PDB entry:
8F1I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8F1I entry

There are 10 chains in PDB entry 8F1I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	C 2	A 34
C	G 4	G 15
G	SER 4	LEU 234
H	SER 4	SER 325
I	VAL 2	ASP 1341
J	ASP 3	ARG 1373
K	ALA 2	LEU 80
M	GLN 12	LEU 476
B	T 39	G 71
D	C 58	T 70

There are132 helices in PDB entry 8F1I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	34	50	Right-handed alpha
Helix 2	AA2	G	77	87	Right-handed alpha
Helix 3	AA3	G	113	115	Right-handed 310
Helix 4	AA4	G	212	234	Right-handed alpha
Helix 5	AA5	H	34	50	Right-handed alpha
Helix 6	AA6	H	77	87	Right-handed alpha
Helix 7	AA7	H	113	115	Right-handed 310
Helix 8	AA8	H	212	227	Right-handed alpha
Helix 9	AA9	H	250	255	Right-handed alpha
Helix 10	AB1	H	256	260	Right-handed 310
Helix 11	AB2	H	263	273	Right-handed alpha
Helix 12	AB3	H	277	284	Right-handed alpha
Helix 13	AB4	H	285	291	Right-handed alpha
Helix 14	AB5	H	296	309	Right-handed alpha
Helix 15	AB6	I	6	10	Right-handed 310
Helix 16	AB7	I	28	40	Right-handed alpha
Helix 17	AB8	I	48	55	Right-handed alpha
Helix 18	AB9	I	81	89	Right-handed alpha
Helix 19	AC1	I	206	213	Right-handed alpha
Helix 20	AC2	I	216	225	Right-handed alpha
Helix 21	AC3	I	242	247	Right-handed 310
Helix 22	AC4	I	270	281	Right-handed alpha
Helix 23	AC5	I	288	294	Right-handed 310
Helix 24	AC6	I	318	328	Right-handed alpha
Helix 25	AC7	I	346	354	Right-handed alpha
Helix 26	AC8	I	360	371	Right-handed alpha
Helix 27	AC9	I	377	390	Right-handed alpha
Helix 28	AD1	I	398	409	Right-handed alpha
Helix 29	AD2	I	421	438	Right-handed alpha
Helix 30	AD3	I	455	480	Right-handed alpha
Helix 31	AD4	I	488	493	Right-handed alpha
Helix 32	AD5	I	495	508	Right-handed alpha
Helix 33	AD6	I	519	527	Right-handed alpha
Helix 34	AD7	I	551	555	Right-handed 310
Helix 35	AD8	I	608	612	Right-handed alpha
Helix 36	AD9	I	663	667	Right-handed 310
Helix 37	AE1	I	670	674	Right-handed 310
Helix 38	AE2	I	675	686	Right-handed alpha
Helix 39	AE3	I	704	712	Right-handed alpha
Helix 40	AE4	I	738	741	Right-handed 310
Helix 41	AE5	I	820	825	Right-handed alpha
Helix 42	AE6	I	896	907	Right-handed alpha
Helix 43	AE7	I	942	982	Right-handed alpha
Helix 44	AE8	I	987	992	Right-handed alpha
Helix 45	AE9	I	1011	1037	Right-handed alpha
Helix 46	AF1	I	1081	1085	Right-handed 310
Helix 47	AF2	I	1099	1101	Right-handed 310
Helix 48	AF3	I	1102	1107	Right-handed alpha
Helix 49	AF4	I	1109	1134	Right-handed alpha
Helix 50	AF5	I	1137	1151	Right-handed alpha
Helix 51	AF6	I	1160	1164	Right-handed 310
Helix 52	AF7	I	1165	1176	Right-handed alpha
Helix 53	AF8	I	1191	1202	Right-handed alpha
Helix 54	AF9	I	1271	1282	Right-handed alpha
Helix 55	AG1	I	1283	1290	Right-handed alpha
Helix 56	AG2	I	1297	1310	Right-handed alpha
Helix 57	AG3	I	1320	1331	Right-handed alpha
Helix 58	AG4	J	4	10	Right-handed alpha
Helix 59	AG5	J	26	33	Right-handed alpha
Helix 60	AG6	J	58	63	Right-handed alpha
Helix 61	AG7	J	77	81	Right-handed 310
Helix 62	AG8	J	94	100	Right-handed 310
Helix 63	AG9	J	114	119	Right-handed alpha
Helix 64	AH1	J	122	129	Right-handed alpha
Helix 65	AH2	J	131	140	Right-handed alpha
Helix 66	AH3	J	161	172	Right-handed alpha
Helix 67	AH4	J	181	191	Right-handed alpha
Helix 68	AH5	J	193	208	Right-handed alpha
Helix 69	AH6	J	211	230	Right-handed alpha
Helix 70	AH7	J	233	236	Right-handed 310
Helix 71	AH8	J	246	250	Right-handed 310
Helix 72	AH9	J	263	286	Right-handed alpha
Helix 73	AI1	J	288	308	Right-handed alpha
Helix 74	AI2	J	326	332	Right-handed alpha
Helix 75	AI3	J	336	342	Right-handed alpha
Helix 76	AI4	J	372	377	Right-handed alpha
Helix 77	AI5	J	377	388	Right-handed alpha
Helix 78	AI6	J	393	404	Right-handed alpha
Helix 79	AI7	J	407	416	Right-handed alpha
Helix 80	AI8	J	430	432	Right-handed 310
Helix 81	AI9	J	450	452	Right-handed 310
Helix 82	AJ1	J	453	458	Right-handed alpha
Helix 83	AJ2	J	475	483	Right-handed alpha
Helix 84	AJ3	J	504	514	Right-handed alpha
Helix 85	AJ4	J	529	539	Right-handed alpha
Helix 86	AJ5	J	574	581	Right-handed alpha
Helix 87	AJ6	J	588	592	Right-handed 310
Helix 88	AJ7	J	598	612	Right-handed alpha
Helix 89	AJ8	J	614	636	Right-handed alpha
Helix 90	AJ9	J	649	670	Right-handed alpha
Helix 91	AK1	J	674	702	Right-handed alpha
Helix 92	AK2	J	720	728	Right-handed alpha
Helix 93	AK3	J	733	742	Right-handed alpha
Helix 94	AK4	J	774	804	Right-handed alpha
Helix 95	AK5	J	865	875	Right-handed alpha
Helix 96	AK6	J	896	900	Right-handed alpha
Helix 97	AK7	J	914	925	Right-handed alpha
Helix 98	AK8	J	926	930	Right-handed 310
Helix 99	AK9	J	1137	1145	Right-handed alpha
Helix 100	AL1	J	1216	1225	Right-handed alpha
Helix 101	AL2	J	1228	1243	Right-handed alpha
Helix 102	AL3	J	1250	1261	Right-handed alpha
Helix 103	AL4	J	1282	1294	Right-handed alpha
Helix 104	AL5	J	1319	1324	Right-handed alpha
Helix 105	AL6	J	1327	1337	Right-handed alpha
Helix 106	AL7	J	1348	1354	Right-handed alpha
Helix 107	AL8	J	1362	1373	Right-handed alpha
Helix 108	AL9	K	6	14	Right-handed alpha
Helix 109	AM1	K	15	32	Right-handed alpha
Helix 110	AM2	K	45	56	Right-handed alpha
Helix 111	AM3	K	60	80	Right-handed alpha
Helix 112	AM4	M	18	25	Right-handed alpha
Helix 113	AM5	M	29	43	Right-handed alpha
Helix 114	AM6	M	119	129	Right-handed alpha
Helix 115	AM7	M	134	147	Right-handed alpha
Helix 116	AM8	M	157	166	Right-handed alpha
Helix 117	AM9	M	171	183	Right-handed alpha
Helix 118	AN1	M	194	206	Right-handed alpha
Helix 119	AN2	M	212	222	Right-handed alpha
Helix 120	AN3	M	224	229	Right-handed alpha
Helix 121	AN4	M	231	240	Right-handed alpha
Helix 122	AN5	M	242	255	Right-handed alpha
Helix 123	AN6	M	259	263	Right-handed 310
Helix 124	AN7	M	300	305	Right-handed alpha
Helix 125	AN8	M	313	351	Right-handed alpha
Helix 126	AN9	M	351	357	Right-handed alpha
Helix 127	AO1	M	366	371	Right-handed alpha
Helix 128	AO2	M	377	385	Right-handed alpha
Helix 129	AO3	M	417	429	Right-handed alpha
Helix 130	AO4	M	438	447	Right-handed alpha
Helix 131	AO5	M	454	465	Right-handed alpha
Helix 132	AO6	M	469	473	Right-handed 310

There are 49 sheets in PDB entry 8F1I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	20	first strand
Strand 2	G	23	31	anti-parallel
Strand 3	G	199	206	anti-parallel
Strand 4	G	182	189	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	97	105	first strand
Strand 2	G	139	150	anti-parallel
Strand 3	G	52	61	anti-parallel
Strand 4	G	171	172	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	91	first strand
Strand 2	G	122	123	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	111	first strand
Strand 2	G	129	133	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	152	153	first strand
Strand 2	G	175	176	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	17	18	first strand
Strand 2	H	23	31	anti-parallel
Strand 3	H	198	207	anti-parallel
Strand 4	H	180	190	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	97	101	first strand
Strand 2	H	142	150	anti-parallel
Strand 3	H	52	61	anti-parallel
Strand 4	H	171	172	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	104	105	first strand
Strand 2	H	139	140	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	109	111	first strand
Strand 2	H	129	132	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	153	first strand
Strand 2	H	175	176	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	13	14	first strand
Strand 2	I	1182	1183	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	I	66	75	anti-parallel
Strand 3	I	93	104	anti-parallel
Strand 4	I	116	128	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	137	first strand
Strand 2	I	142	145	anti-parallel
Strand 3	I	512	514	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	451	454	first strand
Strand 2	I	147	151	anti-parallel
Strand 3	I	530	531	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	155	first strand
Strand 2	I	173	177	anti-parallel
Strand 3	I	184	188	anti-parallel
Strand 4	I	194	198	anti-parallel
Strand 5	I	204	205	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	284	286	first strand
Strand 2	I	238	240	anti-parallel
Strand 3	I	227	231	anti-parallel
Strand 4	I	332	336	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	255	257	first strand
Strand 2	I	260	263	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	301	302	first strand
Strand 2	I	309	311	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	595	anti-parallel
Strand 3	I	598	607	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	595	anti-parallel
Strand 3	I	652	654	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	616	617	first strand
Strand 2	I	633	637	anti-parallel
Strand 3	I	642	646	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	716	717	first strand
Strand 2	I	782	784	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	748	752	first strand
Strand 2	I	731	736	anti-parallel
Strand 3	I	722	727	anti-parallel
Strand 4	I	776	777	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	757	758	first strand
Strand 2	I	764	765	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	789	790	first strand
Strand 2	I	793	794	anti-parallel

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There are 8 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1209	1210	first strand
Strand 2	I	1225	1234	anti-parallel
Strand 3	I	1065	1067	anti-parallel
Strand 4	I	1074	1080	anti-parallel
Strand 5	I	815	819	parallel
Strand 6	I	1096	1098	anti-parallel
Strand 7	I	798	804	parallel
Strand 8	I	1225	1234	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	830	841	first strand
Strand 2	I	1046	1058	anti-parallel
Strand 3	I	925	935	anti-parallel
Strand 4	I	876	878	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	849	850	first strand
Strand 2	I	886	887	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	882	884	first strand
Strand 2	I	918	919	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1268	1270	first strand
Strand 2	J	345	347	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1335	1340	first strand
Strand 2	J	19	24	anti-parallel
Strand 3	J	1341	1342	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	34	37	first strand
Strand 2	J	102	112	parallel
Strand 3	J	238	244	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	159	160	first strand
Strand 2	J	144	146	anti-parallel
Strand 3	J	178	179	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	253	255	first strand
Strand 2	J	259	261	anti-parallel

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There are 7 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	350	357	first strand
Strand 2	J	447	449	parallel
Strand 3	J	365	369	anti-parallel
Strand 4	J	434	442	parallel
Strand 5	J	421	424	anti-parallel
Strand 6	J	465	469	anti-parallel
Strand 7	J	350	357	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	547	557	first strand
Strand 2	J	563	573	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	703	707	first strand
Strand 2	J	713	717	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	809	811	first strand
Strand 2	J	894	895	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	820	822	first strand
Strand 2	J	880	882	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	825	826	first strand
Strand 2	J	831	833	anti-parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	949	951	first strand
Strand 2	J	1016	1019	anti-parallel
Strand 3	J	1002	1003	anti-parallel
Strand 4	J	973	975	anti-parallel
Strand 5	J	965	967	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	957	961	first strand
Strand 2	J	981	985	anti-parallel
Strand 3	J	991	996	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1035	1038	first strand
Strand 2	J	1077	1080	anti-parallel
Strand 3	J	1098	1100	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1046	1048	first strand
Strand 2	J	1059	1061	anti-parallel
Strand 3	J	1105	1107	anti-parallel
Strand 4	J	1122	1123	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1187	1190	first strand
Strand 2	J	1173	1178	anti-parallel
Strand 3	J	1161	1165	anti-parallel
Strand 4	J	1203	1204	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1279	1281	first strand
Strand 2	J	1263	1268	anti-parallel
Strand 3	J	1301	1304	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	47	48	first strand
Strand 2	M	298	299	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	284	289	first strand
Strand 2	M	276	281	anti-parallel
Strand 3	M	390	391	parallel
Strand 4	M	396	397	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	406	408	first strand
Strand 2	M	414	416	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8F1I

Analysis of interatomic Contacts of Structural Units in PDB entry:
8F1I