Analysis of interatomic Contacts of Structural Units in PDB entry:
8F2V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8F2V entry

There are 6 chains in PDB entry 8F2V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 TYR 2THR 211
D
 GLU 1SER 222
A
 TYR 2THR 211
B
 GLU 1SER 222
E
 TYR 2THR 211
F
 GLU 1SER 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 8F2V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
78 82Right-handed 310
Helix 2
AA2
C
123 129Right-handed alpha
Helix 3
AA3
C
183 190Right-handed alpha
Helix 4
AA4
D
87 91Right-handed 310
Helix 5
AA5
D
163 165Right-handed 310
Helix 6
AA6
D
194 196Right-handed 310
Helix 7
AA7
D
209 211Right-handed 310
Helix 8
AA8
A
78 82Right-handed 310
Helix 9
AA9
A
123 128Right-handed alpha
Helix 10
AB1
A
183 188Right-handed alpha
Helix 11
AB2
B
87 91Right-handed 310
Helix 12
AB3
B
163 165Right-handed 310
Helix 13
AB4
B
194 196Right-handed 310
Helix 14
AB5
E
78 82Right-handed 310
Helix 15
AB6
E
123 129Right-handed alpha
Helix 16
AB7
E
183 188Right-handed alpha
Helix 17
AB8
F
28 32Right-handed 310
Helix 18
AB9
F
62 65Right-handed 310
Helix 19
AC1
F
87 91Right-handed 310
Helix 20
AC2
F
163 165Right-handed 310
Helix 21
AC3
F
194 196Right-handed 310
Helix 22
AC4
F
209 211Right-handed 310
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There are 35 sheets in PDB entry 8F2V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 12first strand
Strand 2
C
103 107parallel
Strand 3
C
83 91anti-parallel
Strand 4
C
33 37anti-parallel
Strand 5
C
44 48anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
9 12first strand
Strand 2
C
103 107parallel
Strand 3
C
83 91anti-parallel
Strand 4
C
96 99anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
18 23first strand
Strand 2
C
69 74anti-parallel
Strand 3
C
61 65anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
116 120first strand
Strand 2
C
132 141anti-parallel
Strand 3
C
174 182anti-parallel
Strand 4
C
161 163anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
116 120first strand
Strand 2
C
132 141anti-parallel
Strand 3
C
174 182anti-parallel
Strand 4
C
167 168anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 156first strand
Strand 2
C
147 152anti-parallel
Strand 3
C
193 198anti-parallel
Strand 4
C
203 208anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 6first strand
Strand 2
D
18 24anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
68 73anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
115 118parallel
Strand 3
D
92 98anti-parallel
Strand 4
D
34 39anti-parallel
Strand 5
D
46 51anti-parallel
Strand 6
D
58 60anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
115 118parallel
Strand 3
D
92 98anti-parallel
Strand 4
D
109 110anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
127 131first strand
Strand 2
D
142 152anti-parallel
Strand 3
D
182 192anti-parallel
Strand 4
D
170 172anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
127 131first strand
Strand 2
D
142 152anti-parallel
Strand 3
D
182 192anti-parallel
Strand 4
D
176 178anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
157 161first strand
Strand 2
D
202 207anti-parallel
Strand 3
D
212 217anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
17 24anti-parallel
Strand 3
A
70 75anti-parallel
Strand 4
A
61 65anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 10first strand
Strand 2
A
104 105parallel
Strand 3
A
83 88anti-parallel
Strand 4
A
33 37anti-parallel
Strand 5
A
44 47anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 120first strand
Strand 2
A
132 141anti-parallel
Strand 3
A
174 182anti-parallel
Strand 4
A
161 163anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 120first strand
Strand 2
A
132 141anti-parallel
Strand 3
A
174 182anti-parallel
Strand 4
A
167 168anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 157first strand
Strand 2
A
147 152anti-parallel
Strand 3
A
193 198anti-parallel
Strand 4
A
203 208anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
115 118parallel
Strand 3
B
92 99anti-parallel
Strand 4
B
34 39anti-parallel
Strand 5
B
46 51anti-parallel
Strand 6
B
58 60anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
115 118parallel
Strand 3
B
92 99anti-parallel
Strand 4
B
107 110anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 22first strand
Strand 2
B
78 83anti-parallel
Strand 3
B
68 73anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 131first strand
Strand 2
B
142 150anti-parallel
Strand 3
B
183 192anti-parallel
Strand 4
B
170 172anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 131first strand
Strand 2
B
142 150anti-parallel
Strand 3
B
183 192anti-parallel
Strand 4
B
176 177anti-parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 161first strand
Strand 2
B
202 207anti-parallel
Strand 3
B
212 217anti-parallel
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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 12first strand
Strand 2
E
103 107parallel
Strand 3
E
83 88anti-parallel
Strand 4
E
33 37anti-parallel
Strand 5
E
44 47anti-parallel
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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
18 23first strand
Strand 2
E
69 74anti-parallel
Strand 3
E
61 65anti-parallel
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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
116 120first strand
Strand 2
E
132 141anti-parallel
Strand 3
E
174 182anti-parallel
Strand 4
E
161 163anti-parallel
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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
116 120first strand
Strand 2
E
132 141anti-parallel
Strand 3
E
174 182anti-parallel
Strand 4
E
167 168anti-parallel
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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
155 157first strand
Strand 2
E
147 152anti-parallel
Strand 3
E
193 198anti-parallel
Strand 4
E
203 208anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
4 6first strand
Strand 2
F
22 24anti-parallel
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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 11first strand
Strand 2
F
115 117parallel
Strand 3
F
92 98anti-parallel
Strand 4
F
34 39anti-parallel
Strand 5
F
46 51anti-parallel
Strand 6
F
58 60anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 11first strand
Strand 2
F
115 117parallel
Strand 3
F
92 98anti-parallel
Strand 4
F
109 110anti-parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
18 20first strand
Strand 2
F
78 83anti-parallel
Strand 3
F
68 73anti-parallel
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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
127 131first strand
Strand 2
F
142 150anti-parallel
Strand 3
F
183 192anti-parallel
Strand 4
F
170 172anti-parallel
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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
127 131first strand
Strand 2
F
142 150anti-parallel
Strand 3
F
183 192anti-parallel
Strand 4
F
176 177anti-parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
157 161first strand
Strand 2
F
202 207anti-parallel
Strand 3
F
212 217anti-parallel
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