Analysis of interatomic Contacts of Structural Units in PDB entry:
8F3C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8F3C entry

There are 8 chains in PDB entry 8F3C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	C 9	G 38
B	C 1	G 31
G	PHE 8	LEU 234
H	VAL 5	LEU 234
I	VAL 2	ASP 1341
J	GLU 16	ARG 1373
K	ALA 2	LEU 80
R	G 1	A 47

There are107 helices in PDB entry 8F3C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	34	50	Right-handed alpha
Helix 2	AA2	G	77	88	Right-handed alpha
Helix 3	AA3	G	154	158	Right-handed 310
Helix 4	AA4	G	212	229	Right-handed alpha
Helix 5	AA5	H	34	49	Right-handed alpha
Helix 6	AA6	H	77	87	Right-handed alpha
Helix 7	AA7	H	113	115	Right-handed 310
Helix 8	AA8	H	154	158	Right-handed 310
Helix 9	AA9	H	212	227	Right-handed alpha
Helix 10	AB1	H	228	232	Right-handed 310
Helix 11	AB2	I	4	10	Right-handed alpha
Helix 12	AB3	I	28	40	Right-handed alpha
Helix 13	AB4	I	48	56	Right-handed alpha
Helix 14	AB5	I	81	89	Right-handed alpha
Helix 15	AB6	I	163	167	Right-handed 310
Helix 16	AB7	I	206	213	Right-handed alpha
Helix 17	AB8	I	216	225	Right-handed alpha
Helix 18	AB9	I	242	247	Right-handed 310
Helix 19	AC1	I	270	281	Right-handed alpha
Helix 20	AC2	I	291	295	Right-handed 310
Helix 21	AC3	I	318	329	Right-handed alpha
Helix 22	AC4	I	346	354	Right-handed alpha
Helix 23	AC5	I	358	371	Right-handed alpha
Helix 24	AC6	I	377	389	Right-handed alpha
Helix 25	AC7	I	398	409	Right-handed alpha
Helix 26	AC8	I	421	438	Right-handed alpha
Helix 27	AC9	I	455	481	Right-handed alpha
Helix 28	AD1	I	494	508	Right-handed alpha
Helix 29	AD2	I	519	527	Right-handed alpha
Helix 30	AD3	I	544	549	Right-handed alpha
Helix 31	AD4	I	551	555	Right-handed 310
Helix 32	AD5	I	607	612	Right-handed alpha
Helix 33	AD6	I	648	650	Right-handed 310
Helix 34	AD7	I	662	667	Right-handed alpha
Helix 35	AD8	I	675	687	Right-handed alpha
Helix 36	AD9	I	704	712	Right-handed alpha
Helix 37	AE1	I	738	741	Right-handed 310
Helix 38	AE2	I	820	825	Right-handed alpha
Helix 39	AE3	I	858	865	Right-handed alpha
Helix 40	AE4	I	942	979	Right-handed alpha
Helix 41	AE5	I	985	992	Right-handed alpha
Helix 42	AE6	I	1005	1038	Right-handed alpha
Helix 43	AE7	I	1081	1085	Right-handed 310
Helix 44	AE8	I	1099	1103	Right-handed 310
Helix 45	AE9	I	1109	1134	Right-handed alpha
Helix 46	AF1	I	1137	1151	Right-handed alpha
Helix 47	AF2	I	1167	1176	Right-handed alpha
Helix 48	AF3	I	1191	1202	Right-handed alpha
Helix 49	AF4	I	1238	1243	Right-handed alpha
Helix 50	AF5	I	1271	1281	Right-handed alpha
Helix 51	AF6	I	1285	1292	Right-handed alpha
Helix 52	AF7	I	1297	1311	Right-handed alpha
Helix 53	AF8	I	1320	1334	Right-handed alpha
Helix 54	AF9	J	26	33	Right-handed alpha
Helix 55	AG1	J	58	63	Right-handed alpha
Helix 56	AG2	J	77	81	Right-handed 310
Helix 57	AG3	J	94	100	Right-handed 310
Helix 58	AG4	J	113	118	Right-handed alpha
Helix 59	AG5	J	122	129	Right-handed alpha
Helix 60	AG6	J	131	140	Right-handed alpha
Helix 61	AG7	J	161	172	Right-handed alpha
Helix 62	AG8	J	181	192	Right-handed alpha
Helix 63	AG9	J	193	208	Right-handed alpha
Helix 64	AH1	J	210	230	Right-handed alpha
Helix 65	AH2	J	233	236	Right-handed 310
Helix 66	AH3	J	246	250	Right-handed 310
Helix 67	AH4	J	264	286	Right-handed alpha
Helix 68	AH5	J	288	309	Right-handed alpha
Helix 69	AH6	J	336	342	Right-handed alpha
Helix 70	AH7	J	370	377	Right-handed alpha
Helix 71	AH8	J	377	388	Right-handed alpha
Helix 72	AH9	J	393	404	Right-handed alpha
Helix 73	AI1	J	405	416	Right-handed alpha
Helix 74	AI2	J	430	432	Right-handed 310
Helix 75	AI3	J	452	458	Right-handed alpha
Helix 76	AI4	J	473	484	Right-handed alpha
Helix 77	AI5	J	504	514	Right-handed alpha
Helix 78	AI6	J	529	539	Right-handed alpha
Helix 79	AI7	J	574	581	Right-handed alpha
Helix 80	AI8	J	588	592	Right-handed 310
Helix 81	AI9	J	597	612	Right-handed alpha
Helix 82	AJ1	J	614	636	Right-handed alpha
Helix 83	AJ2	J	649	671	Right-handed alpha
Helix 84	AJ3	J	674	703	Right-handed alpha
Helix 85	AJ4	J	720	728	Right-handed alpha
Helix 86	AJ5	J	733	742	Right-handed alpha
Helix 87	AJ6	J	768	804	Right-handed alpha
Helix 88	AJ7	J	834	839	Right-handed alpha
Helix 89	AJ8	J	865	875	Right-handed alpha
Helix 90	AJ9	J	896	900	Right-handed alpha
Helix 91	AK1	J	915	925	Right-handed alpha
Helix 92	AK2	J	926	930	Right-handed 310
Helix 93	AK3	J	1137	1146	Right-handed alpha
Helix 94	AK4	J	1216	1224	Right-handed alpha
Helix 95	AK5	J	1225	1244	Right-handed alpha
Helix 96	AK6	J	1249	1261	Right-handed alpha
Helix 97	AK7	J	1282	1295	Right-handed alpha
Helix 98	AK8	J	1308	1313	Right-handed alpha
Helix 99	AK9	J	1318	1326	Right-handed alpha
Helix 100	AL1	J	1327	1339	Right-handed alpha
Helix 101	AL2	J	1346	1354	Right-handed alpha
Helix 102	AL3	J	1360	1372	Right-handed alpha
Helix 103	AL4	K	6	13	Right-handed alpha
Helix 104	AL5	K	17	33	Right-handed alpha
Helix 105	AL6	K	45	56	Right-handed alpha
Helix 106	AL7	K	60	77	Right-handed alpha
Helix 107	AL8	K	78	80	Right-handed 310

There are 45 sheets in PDB entry 8F3C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	13	17	first strand
Strand 2	G	25	31	anti-parallel
Strand 3	G	199	203	anti-parallel
Strand 4	G	185	189	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	53	first strand
Strand 2	G	149	150	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	115	116	first strand
Strand 2	G	97	105	anti-parallel
Strand 3	G	139	147	anti-parallel
Strand 4	G	56	61	anti-parallel
Strand 5	G	170	172	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	91	first strand
Strand 2	G	122	123	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	111	first strand
Strand 2	G	129	133	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	180	182	first strand
Strand 2	G	206	207	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	23	27	first strand
Strand 2	H	198	207	anti-parallel
Strand 3	H	180	190	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	97	101	first strand
Strand 2	H	142	150	anti-parallel
Strand 3	H	52	61	anti-parallel
Strand 4	H	171	172	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	91	first strand
Strand 2	H	122	123	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	104	105	first strand
Strand 2	H	139	140	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	108	111	first strand
Strand 2	H	129	133	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	153	first strand
Strand 2	H	175	176	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	13	14	first strand
Strand 2	I	1182	1183	parallel
Strand 3	I	700	701	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	66	75	first strand
Strand 2	I	93	105	anti-parallel
Strand 3	I	114	128	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	137	first strand
Strand 2	I	142	145	anti-parallel
Strand 3	I	512	514	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	451	454	first strand
Strand 2	I	147	151	anti-parallel
Strand 3	I	530	531	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	158	first strand
Strand 2	I	173	177	anti-parallel
Strand 3	I	184	189	anti-parallel
Strand 4	I	193	198	anti-parallel
Strand 5	I	204	205	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	227	231	first strand
Strand 2	I	332	336	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	239	240	first strand
Strand 2	I	284	285	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	255	257	first strand
Strand 2	I	260	263	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	301	302	first strand
Strand 2	I	309	311	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	588	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	599	603	first strand
Strand 2	I	591	594	anti-parallel
Strand 3	I	652	654	anti-parallel
Strand 4	I	616	617	parallel
Strand 5	I	633	637	anti-parallel
Strand 6	I	642	646	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	749	752	first strand
Strand 2	I	731	736	anti-parallel
Strand 3	I	722	727	anti-parallel
Strand 4	I	776	777	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	768	769	first strand
Strand 2	I	784	785	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	789	790	first strand
Strand 2	I	793	794	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1065	1067	first strand
Strand 2	I	1073	1080	anti-parallel
Strand 3	I	816	819	parallel
Strand 4	I	1096	1098	anti-parallel
Strand 5	I	800	804	parallel
Strand 6	I	1225	1230	anti-parallel
Strand 7	I	1209	1210	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	830	841	first strand
Strand 2	I	1046	1058	anti-parallel
Strand 3	I	926	935	anti-parallel
Strand 4	I	876	877	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	882	884	first strand
Strand 2	I	918	919	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1087	1088	first strand
Strand 2	I	1212	1213	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1269	1270	first strand
Strand 2	J	345	346	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1335	1339	first strand
Strand 2	J	20	24	anti-parallel
Strand 3	J	1341	1342	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	34	37	first strand
Strand 2	J	102	112	parallel
Strand 3	J	238	244	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	144	145	first strand
Strand 2	J	159	160	anti-parallel

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There are 7 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	350	356	first strand
Strand 2	J	447	448	parallel
Strand 3	J	365	369	anti-parallel
Strand 4	J	434	442	parallel
Strand 5	J	421	425	anti-parallel
Strand 6	J	465	469	anti-parallel
Strand 7	J	350	356	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	547	556	first strand
Strand 2	J	564	573	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	809	811	first strand
Strand 2	J	894	895	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	820	822	first strand
Strand 2	J	880	882	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	825	826	first strand
Strand 2	J	831	833	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	949	951	first strand
Strand 2	J	1016	1019	anti-parallel
Strand 3	J	1002	1003	anti-parallel
Strand 4	J	973	974	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	957	960	first strand
Strand 2	J	981	985	anti-parallel
Strand 3	J	991	996	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1034	1036	first strand
Strand 2	J	1079	1081	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1059	1061	first strand
Strand 2	J	1105	1107	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1162	1165	first strand
Strand 2	J	1173	1178	anti-parallel
Strand 3	J	1187	1190	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1279	1281	first strand
Strand 2	J	1263	1265	anti-parallel
Strand 3	J	1303	1304	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8F3C

Analysis of interatomic Contacts of Structural Units in PDB entry:
8F3C