Analysis of interatomic Contacts of Structural Units in PDB entry:
8F67

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8F67 entry

There are 3 chains in PDB entry 8F67 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 39	GLN 678
B	THR 39	GLN 678
C	THR 39	GLN 678

There are 87 helices in PDB entry 8F67. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	39	58	Right-handed alpha
Helix 2	AA2	A	60	66	Right-handed alpha
Helix 3	AA3	A	79	94	Right-handed alpha
Helix 4	AA4	A	150	154	Right-handed 310
Helix 5	AA5	A	197	201	Right-handed 310
Helix 6	AA6	A	204	216	Right-handed alpha
Helix 7	AA7	A	220	228	Right-handed alpha
Helix 8	AA8	A	267	270	Right-handed 310
Helix 9	AA9	A	271	276	Right-handed alpha
Helix 10	AB1	A	282	289	Right-handed alpha
Helix 11	AB2	A	302	307	Right-handed alpha
Helix 12	AB3	A	307	313	Right-handed alpha
Helix 13	AB4	A	348	360	Right-handed alpha
Helix 14	AB5	A	386	392	Right-handed alpha
Helix 15	AB6	A	395	403	Right-handed alpha
Helix 16	AB7	A	412	416	Right-handed 310
Helix 17	AB8	A	421	423	Right-handed 310
Helix 18	AB9	A	424	435	Right-handed alpha
Helix 19	AC1	A	454	458	Right-handed 310
Helix 20	AC2	A	472	480	Right-handed alpha
Helix 21	AC3	A	481	493	Right-handed alpha
Helix 22	AC4	A	493	503	Right-handed alpha
Helix 23	AC5	A	529	538	Right-handed alpha
Helix 24	AC6	A	546	555	Right-handed alpha
Helix 25	AC7	A	556	559	Right-handed 310
Helix 26	AC8	A	582	599	Right-handed alpha
Helix 27	AC9	A	604	611	Right-handed 310
Helix 28	AD1	A	662	665	Right-handed 310
Helix 29	AD2	A	666	677	Right-handed alpha
Helix 30	AD3	B	40	58	Right-handed alpha
Helix 31	AD4	B	60	66	Right-handed alpha
Helix 32	AD5	B	79	94	Right-handed alpha
Helix 33	AD6	B	150	154	Right-handed 310
Helix 34	AD7	B	197	201	Right-handed 310
Helix 35	AD8	B	204	216	Right-handed alpha
Helix 36	AD9	B	220	228	Right-handed alpha
Helix 37	AE1	B	267	270	Right-handed 310
Helix 38	AE2	B	271	276	Right-handed alpha
Helix 39	AE3	B	282	289	Right-handed alpha
Helix 40	AE4	B	302	307	Right-handed alpha
Helix 41	AE5	B	307	313	Right-handed alpha
Helix 42	AE6	B	348	360	Right-handed alpha
Helix 43	AE7	B	386	392	Right-handed alpha
Helix 44	AE8	B	395	405	Right-handed alpha
Helix 45	AE9	B	412	416	Right-handed 310
Helix 46	AF1	B	421	423	Right-handed 310
Helix 47	AF2	B	424	435	Right-handed alpha
Helix 48	AF3	B	454	458	Right-handed 310
Helix 49	AF4	B	472	480	Right-handed alpha
Helix 50	AF5	B	481	493	Right-handed alpha
Helix 51	AF6	B	493	503	Right-handed alpha
Helix 52	AF7	B	529	538	Right-handed alpha
Helix 53	AF8	B	546	555	Right-handed alpha
Helix 54	AF9	B	556	559	Right-handed 310
Helix 55	AG1	B	582	599	Right-handed alpha
Helix 56	AG2	B	604	611	Right-handed 310
Helix 57	AG3	B	662	665	Right-handed 310
Helix 58	AG4	B	666	677	Right-handed alpha
Helix 59	AG5	C	40	58	Right-handed alpha
Helix 60	AG6	C	60	66	Right-handed alpha
Helix 61	AG7	C	79	94	Right-handed alpha
Helix 62	AG8	C	150	154	Right-handed 310
Helix 63	AG9	C	197	201	Right-handed 310
Helix 64	AH1	C	204	218	Right-handed alpha
Helix 65	AH2	C	220	228	Right-handed alpha
Helix 66	AH3	C	267	270	Right-handed 310
Helix 67	AH4	C	271	276	Right-handed alpha
Helix 68	AH5	C	282	289	Right-handed alpha
Helix 69	AH6	C	302	307	Right-handed alpha
Helix 70	AH7	C	307	313	Right-handed alpha
Helix 71	AH8	C	348	360	Right-handed alpha
Helix 72	AH9	C	386	392	Right-handed alpha
Helix 73	AI1	C	395	405	Right-handed alpha
Helix 74	AI2	C	412	416	Right-handed 310
Helix 75	AI3	C	421	423	Right-handed 310
Helix 76	AI4	C	424	435	Right-handed alpha
Helix 77	AI5	C	454	458	Right-handed 310
Helix 78	AI6	C	472	480	Right-handed alpha
Helix 79	AI7	C	481	493	Right-handed alpha
Helix 80	AI8	C	493	502	Right-handed alpha
Helix 81	AI9	C	529	538	Right-handed alpha
Helix 82	AJ1	C	546	555	Right-handed alpha
Helix 83	AJ2	C	556	559	Right-handed 310
Helix 84	AJ3	C	582	599	Right-handed alpha
Helix 85	AJ4	C	604	611	Right-handed 310
Helix 86	AJ5	C	662	665	Right-handed 310
Helix 87	AJ6	C	666	677	Right-handed alpha

There are 27 sheets in PDB entry 8F67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	106	first strand
Strand 2	A	113	123	anti-parallel
Strand 3	A	128	139	anti-parallel
Strand 4	A	146	148	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	169	first strand
Strand 2	A	316	322	anti-parallel
Strand 3	A	328	335	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	244	first strand
Strand 2	A	183	195	anti-parallel
Strand 3	A	255	264	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	244	first strand
Strand 2	A	183	195	anti-parallel
Strand 3	A	176	177	anti-parallel
Strand 4	A	343	344	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	277	280	first strand
Strand 2	A	297	301	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	382	first strand
Strand 2	A	364	369	anti-parallel
Strand 3	A	648	653	anti-parallel
Strand 4	A	632	640	anti-parallel
Strand 5	A	615	623	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	444	445	first strand
Strand 2	A	470	471	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	450	451	first strand
Strand 2	A	462	463	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	563	564	first strand
Strand 2	A	576	577	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	106	first strand
Strand 2	B	113	123	anti-parallel
Strand 3	B	128	139	anti-parallel
Strand 4	B	146	148	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	169	first strand
Strand 2	B	316	322	anti-parallel
Strand 3	B	328	335	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	239	244	first strand
Strand 2	B	183	195	anti-parallel
Strand 3	B	255	264	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	239	244	first strand
Strand 2	B	183	195	anti-parallel
Strand 3	B	176	177	anti-parallel
Strand 4	B	343	344	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	277	280	first strand
Strand 2	B	297	301	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	382	first strand
Strand 2	B	364	369	anti-parallel
Strand 3	B	648	653	anti-parallel
Strand 4	B	632	640	anti-parallel
Strand 5	B	615	623	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	444	445	first strand
Strand 2	B	470	471	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	450	451	first strand
Strand 2	B	462	463	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	563	564	first strand
Strand 2	B	576	577	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	97	106	first strand
Strand 2	C	113	123	anti-parallel
Strand 3	C	128	139	anti-parallel
Strand 4	C	146	148	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	163	169	first strand
Strand 2	C	316	322	anti-parallel
Strand 3	C	328	335	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	239	244	first strand
Strand 2	C	183	195	anti-parallel
Strand 3	C	255	264	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	239	244	first strand
Strand 2	C	183	195	anti-parallel
Strand 3	C	176	177	anti-parallel
Strand 4	C	343	344	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	277	280	first strand
Strand 2	C	297	301	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	382	first strand
Strand 2	C	364	369	anti-parallel
Strand 3	C	648	653	anti-parallel
Strand 4	C	632	640	anti-parallel
Strand 5	C	615	623	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	444	445	first strand
Strand 2	C	470	471	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	450	451	first strand
Strand 2	C	462	463	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	563	564	first strand
Strand 2	C	576	577	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8F67

Analysis of interatomic Contacts of Structural Units in PDB entry:
8F67