Analysis of interatomic Contacts of Structural Units in PDB entry:
8F6N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8F6N entry

There are 2 chains in PDB entry 8F6N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	LEU 1017
B	PRO 3	LEU 312

There are184 helices in PDB entry 8F6N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	16	Right-handed alpha
Helix 2	AA2	A	30	39	Right-handed alpha
Helix 3	AA3	A	68	79	Right-handed alpha
Helix 4	AA4	A	85	90	Right-handed alpha
Helix 5	AA5	A	96	106	Right-handed alpha
Helix 6	AA6	A	108	120	Right-handed alpha
Helix 7	AA7	A	122	130	Right-handed alpha
Helix 8	AA8	A	136	145	Right-handed 310
Helix 9	AA9	A	151	167	Right-handed alpha
Helix 10	AB1	A	178	182	Right-handed 310
Helix 11	AB2	A	184	188	Right-handed 310
Helix 12	AB3	A	196	210	Right-handed alpha
Helix 13	AB4	A	225	230	Right-handed alpha
Helix 14	AB5	A	237	250	Right-handed alpha
Helix 15	AB6	A	267	274	Right-handed alpha
Helix 16	AB7	A	291	295	Right-handed 310
Helix 17	AB8	A	306	317	Right-handed alpha
Helix 18	AB9	A	341	352	Right-handed alpha
Helix 19	AC1	A	366	370	Right-handed 310
Helix 20	AC2	A	374	383	Right-handed alpha
Helix 21	AC3	A	444	451	Right-handed alpha
Helix 22	AC4	A	480	484	Right-handed 310
Helix 23	AC5	A	488	511	Right-handed alpha
Helix 24	AC6	A	526	531	Right-handed 310
Helix 25	AC7	A	551	555	Right-handed 310
Helix 26	AC8	A	556	567	Right-handed alpha
Helix 27	AC9	A	579	582	Right-handed 310
Helix 28	AD1	A	617	632	Right-handed alpha
Helix 29	AD2	A	646	660	Right-handed alpha
Helix 30	AD3	A	683	686	Right-handed 310
Helix 31	AD4	A	687	702	Right-handed alpha
Helix 32	AD5	A	716	727	Right-handed alpha
Helix 33	AD6	A	767	769	Right-handed 310
Helix 34	AD7	A	770	785	Right-handed alpha
Helix 35	AD8	A	798	808	Right-handed alpha
Helix 36	AD9	A	816	821	Right-handed alpha
Helix 37	AE1	A	825	841	Right-handed alpha
Helix 38	AE2	A	842	847	Right-handed 310
Helix 39	AE3	A	879	891	Right-handed alpha
Helix 40	AE4	A	892	897	Right-handed alpha
Helix 41	AE5	A	920	924	Right-handed 310
Helix 42	AE6	A	926	932	Right-handed 310
Helix 43	AE7	A	934	938	Right-handed 310
Helix 44	AE8	A	950	953	Right-handed 310
Helix 45	AE9	A	957	967	Right-handed alpha
Helix 46	AF1	A	990	996	Right-handed alpha
Helix 47	AF2	B	9	16	Right-handed alpha
Helix 48	AF3	B	30	42	Right-handed alpha
Helix 49	AF4	B	68	79	Right-handed alpha
Helix 50	AF5	B	85	90	Right-handed alpha
Helix 51	AF6	B	96	106	Right-handed alpha
Helix 52	AF7	B	108	120	Right-handed alpha
Helix 53	AF8	B	122	130	Right-handed alpha
Helix 54	AF9	B	131	134	Right-handed 310
Helix 55	AG1	B	135	140	Right-handed alpha
Helix 56	AG2	B	141	145	Right-handed 310
Helix 57	AG3	B	151	167	Right-handed alpha
Helix 58	AG4	B	178	182	Right-handed 310
Helix 59	AG5	B	183	188	Right-handed 310
Helix 60	AG6	B	196	210	Right-handed alpha
Helix 61	AG7	B	225	230	Right-handed alpha
Helix 62	AG8	B	237	250	Right-handed alpha
Helix 63	AG9	B	267	274	Right-handed alpha
Helix 64	AH1	B	291	295	Right-handed 310
Helix 65	AH2	B	298	301	Right-handed 310
Helix 66	AH3	B	306	318	Right-handed alpha
Helix 67	AH4	B	341	354	Right-handed alpha
Helix 68	AH5	B	366	370	Right-handed 310
Helix 69	AH6	B	376	383	Right-handed alpha
Helix 70	AH7	B	444	451	Right-handed alpha
Helix 71	AH8	B	480	484	Right-handed 310
Helix 72	AH9	B	488	511	Right-handed alpha
Helix 73	AI1	B	526	531	Right-handed 310
Helix 74	AI2	B	551	555	Right-handed 310
Helix 75	AI3	B	556	567	Right-handed alpha
Helix 76	AI4	B	578	582	Right-handed 310
Helix 77	AI5	B	617	632	Right-handed alpha
Helix 78	AI6	B	646	660	Right-handed alpha
Helix 79	AI7	B	683	686	Right-handed 310
Helix 80	AI8	B	687	700	Right-handed alpha
Helix 81	AI9	B	716	727	Right-handed alpha
Helix 82	AJ1	B	767	769	Right-handed 310
Helix 83	AJ2	B	770	785	Right-handed alpha
Helix 84	AJ3	B	798	809	Right-handed alpha
Helix 85	AJ4	B	816	821	Right-handed alpha
Helix 86	AJ5	B	823	825	Right-handed 310
Helix 87	AJ6	B	826	841	Right-handed alpha
Helix 88	AJ7	B	842	847	Right-handed 310
Helix 89	AJ8	B	879	890	Right-handed alpha
Helix 90	AJ9	B	920	925	Right-handed alpha
Helix 91	AK1	B	926	932	Right-handed 310
Helix 92	AK2	B	934	938	Right-handed 310
Helix 93	AK3	B	957	967	Right-handed alpha
Helix 94	AK4	B	990	996	Right-handed alpha
Helix 95	AK5	C	9	16	Right-handed alpha
Helix 96	AK6	C	17	19	Right-handed 310
Helix 97	AK7	C	30	42	Right-handed alpha
Helix 98	AK8	C	68	79	Right-handed alpha
Helix 99	AK9	C	85	90	Right-handed alpha
Helix 100	AL1	C	96	106	Right-handed alpha
Helix 101	AL2	C	108	120	Right-handed alpha
Helix 102	AL3	C	122	130	Right-handed alpha
Helix 103	AL4	C	131	145	Right-handed 310
Helix 104	AL5	C	151	167	Right-handed alpha
Helix 105	AL6	C	183	188	Right-handed 310
Helix 106	AL7	C	196	210	Right-handed alpha
Helix 107	AL8	C	225	230	Right-handed alpha
Helix 108	AL9	C	237	251	Right-handed alpha
Helix 109	AM1	C	267	274	Right-handed alpha
Helix 110	AM2	C	291	295	Right-handed 310
Helix 111	AM3	C	306	318	Right-handed alpha
Helix 112	AM4	C	341	354	Right-handed alpha
Helix 113	AM5	C	366	370	Right-handed 310
Helix 114	AM6	C	373	383	Right-handed alpha
Helix 115	AM7	C	444	451	Right-handed alpha
Helix 116	AM8	C	480	484	Right-handed 310
Helix 117	AM9	C	488	511	Right-handed alpha
Helix 118	AN1	C	526	531	Right-handed 310
Helix 119	AN2	C	551	555	Right-handed 310
Helix 120	AN3	C	556	567	Right-handed alpha
Helix 121	AN4	C	578	582	Right-handed 310
Helix 122	AN5	C	617	632	Right-handed alpha
Helix 123	AN6	C	646	660	Right-handed alpha
Helix 124	AN7	C	683	686	Right-handed 310
Helix 125	AN8	C	687	702	Right-handed alpha
Helix 126	AN9	C	716	727	Right-handed alpha
Helix 127	AO1	C	767	769	Right-handed 310
Helix 128	AO2	C	770	785	Right-handed alpha
Helix 129	AO3	C	798	808	Right-handed alpha
Helix 130	AO4	C	816	821	Right-handed alpha
Helix 131	AO5	C	825	841	Right-handed alpha
Helix 132	AO6	C	842	847	Right-handed 310
Helix 133	AO7	C	879	896	Right-handed alpha
Helix 134	AO8	C	920	925	Right-handed alpha
Helix 135	AO9	C	926	932	Right-handed 310
Helix 136	AP1	C	934	938	Right-handed 310
Helix 137	AP2	C	957	967	Right-handed alpha
Helix 138	AP3	C	990	996	Right-handed alpha
Helix 139	AP4	D	9	16	Right-handed alpha
Helix 140	AP5	D	17	19	Right-handed 310
Helix 141	AP6	D	30	42	Right-handed alpha
Helix 142	AP7	D	68	79	Right-handed alpha
Helix 143	AP8	D	85	90	Right-handed alpha
Helix 144	AP9	D	96	106	Right-handed alpha
Helix 145	AQ1	D	108	120	Right-handed alpha
Helix 146	AQ2	D	122	130	Right-handed alpha
Helix 147	AQ3	D	131	134	Right-handed 310
Helix 148	AQ4	D	135	140	Right-handed alpha
Helix 149	AQ5	D	141	145	Right-handed 310
Helix 150	AQ6	D	151	167	Right-handed alpha
Helix 151	AQ7	D	178	182	Right-handed 310
Helix 152	AQ8	D	184	188	Right-handed 310
Helix 153	AQ9	D	196	210	Right-handed alpha
Helix 154	AR1	D	225	230	Right-handed alpha
Helix 155	AR2	D	237	251	Right-handed alpha
Helix 156	AR3	D	267	275	Right-handed alpha
Helix 157	AR4	D	306	318	Right-handed alpha
Helix 158	AR5	D	341	353	Right-handed alpha
Helix 159	AR6	D	373	383	Right-handed alpha
Helix 160	AR7	D	444	451	Right-handed alpha
Helix 161	AR8	D	480	484	Right-handed 310
Helix 162	AR9	D	488	511	Right-handed alpha
Helix 163	AS1	D	526	531	Right-handed 310
Helix 164	AS2	D	551	555	Right-handed 310
Helix 165	AS3	D	556	567	Right-handed alpha
Helix 166	AS4	D	578	582	Right-handed 310
Helix 167	AS5	D	617	632	Right-handed alpha
Helix 168	AS6	D	646	660	Right-handed alpha
Helix 169	AS7	D	683	686	Right-handed 310
Helix 170	AS8	D	687	700	Right-handed alpha
Helix 171	AS9	D	716	728	Right-handed alpha
Helix 172	AT1	D	767	769	Right-handed 310
Helix 173	AT2	D	770	785	Right-handed alpha
Helix 174	AT3	D	798	808	Right-handed alpha
Helix 175	AT4	D	816	822	Right-handed alpha
Helix 176	AT5	D	825	840	Right-handed alpha
Helix 177	AT6	D	841	847	Right-handed 310
Helix 178	AT7	D	879	891	Right-handed alpha
Helix 179	AT8	D	920	925	Right-handed alpha
Helix 180	AT9	D	926	932	Right-handed 310
Helix 181	AU1	D	934	938	Right-handed 310
Helix 182	AU2	D	950	953	Right-handed 310
Helix 183	AU3	D	957	967	Right-handed alpha
Helix 184	AU4	D	990	996	Right-handed alpha

There are 39 sheets in PDB entry 8F6N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	254	257	first strand
Strand 2	A	214	218	parallel
Strand 3	A	190	193	parallel
Strand 4	A	278	281	parallel
Strand 5	A	476	478	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	287	288	first strand
Strand 2	A	440	441	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	303	305	first strand
Strand 2	A	433	436	parallel
Strand 3	A	333	338	parallel
Strand 4	A	356	363	parallel
Strand 5	A	386	389	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	391	399	first strand
Strand 2	A	402	413	anti-parallel
Strand 3	A	419	428	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	535	537	first strand
Strand 2	A	540	542	anti-parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	576	577	first strand
Strand 2	A	636	642	parallel
Strand 3	A	664	668	parallel
Strand 4	A	706	710	parallel
Strand 5	A	732	734	parallel
Strand 6	A	790	793	parallel
Strand 7	A	812	815	parallel
Strand 8	A	546	548	parallel
Strand 9	A	570	572	parallel
Strand 10	A	636	642	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	590	592	first strand
Strand 2	A	607	609	anti-parallel
Strand 3	A	763	766	anti-parallel
Strand 4	A	738	740	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	944	948	first strand
Strand 2	A	1002	1006	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	971	973	first strand
Strand 2	A	980	982	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	254	256	first strand
Strand 2	B	214	217	parallel
Strand 3	B	190	193	parallel
Strand 4	B	278	281	parallel
Strand 5	B	476	478	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	287	288	first strand
Strand 2	B	440	441	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	303	305	first strand
Strand 2	B	433	436	parallel
Strand 3	B	334	338	parallel
Strand 4	B	358	362	parallel
Strand 5	B	386	388	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	391	398	first strand
Strand 2	B	403	413	anti-parallel
Strand 3	B	419	430	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	535	537	first strand
Strand 2	B	540	542	anti-parallel

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There are 9 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	546	548	first strand
Strand 2	B	570	576	parallel
Strand 3	B	636	641	parallel
Strand 4	B	664	668	parallel
Strand 5	B	706	710	parallel
Strand 6	B	732	734	parallel
Strand 7	B	790	793	parallel
Strand 8	B	812	815	parallel
Strand 9	B	546	548	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	590	592	first strand
Strand 2	B	607	609	anti-parallel
Strand 3	B	763	766	anti-parallel
Strand 4	B	738	740	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	944	948	first strand
Strand 2	B	1002	1006	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	971	973	first strand
Strand 2	B	980	982	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	254	257	first strand
Strand 2	C	214	218	parallel
Strand 3	C	190	193	parallel
Strand 4	C	278	281	parallel
Strand 5	C	476	478	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	287	288	first strand
Strand 2	C	440	441	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	303	305	first strand
Strand 2	C	433	436	parallel
Strand 3	C	334	338	parallel
Strand 4	C	358	363	parallel
Strand 5	C	386	389	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	391	399	first strand
Strand 2	C	402	411	anti-parallel
Strand 3	C	421	430	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	535	537	first strand
Strand 2	C	540	542	anti-parallel

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There are 9 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	546	548	first strand
Strand 2	C	570	572	parallel
Strand 3	C	636	641	parallel
Strand 4	C	664	668	parallel
Strand 5	C	706	709	parallel
Strand 6	C	731	734	parallel
Strand 7	C	790	793	parallel
Strand 8	C	812	815	parallel
Strand 9	C	546	548	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	590	592	first strand
Strand 2	C	607	609	anti-parallel
Strand 3	C	763	766	anti-parallel
Strand 4	C	738	740	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	743	744	first strand
Strand 2	C	750	751	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	944	948	first strand
Strand 2	C	1002	1006	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	971	973	first strand
Strand 2	C	980	982	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	254	257	first strand
Strand 2	D	214	218	parallel
Strand 3	D	190	193	parallel
Strand 4	D	278	281	parallel
Strand 5	D	476	478	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	287	288	first strand
Strand 2	D	440	441	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	303	305	first strand
Strand 2	D	433	436	parallel
Strand 3	D	334	338	parallel
Strand 4	D	358	362	parallel
Strand 5	D	386	388	parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	391	399	first strand
Strand 2	D	402	412	anti-parallel
Strand 3	D	420	430	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	456	457	first strand
Strand 2	D	461	462	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	535	537	first strand
Strand 2	D	540	542	anti-parallel

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There are 9 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	546	548	first strand
Strand 2	D	570	572	parallel
Strand 3	D	636	641	parallel
Strand 4	D	664	668	parallel
Strand 5	D	706	710	parallel
Strand 6	D	732	734	parallel
Strand 7	D	790	792	parallel
Strand 8	D	812	815	parallel
Strand 9	D	546	548	parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	590	592	first strand
Strand 2	D	607	609	anti-parallel
Strand 3	D	763	766	anti-parallel
Strand 4	D	738	740	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	859	860	first strand
Strand 2	D	863	864	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	944	948	first strand
Strand 2	D	1002	1006	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	971	973	first strand
Strand 2	D	980	982	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8F6N

Analysis of interatomic Contacts of Structural Units in PDB entry:
8F6N