Analysis of interatomic Contacts of Structural Units in PDB entry:
8F6P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8F6P entry

There is 1 chain in PDB entry 8F6P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 119ALA 1780
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 8F6P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
119 131Right-handed alpha
Helix 2
AA2
A
131 150Right-handed alpha
Helix 3
AA3
A
155 180Right-handed alpha
Helix 4
AA4
A
194 211Right-handed alpha
Helix 5
AA5
A
217 227Right-handed 310
Helix 6
AA6
A
228 234Right-handed alpha
Helix 7
AA7
A
234 251Right-handed alpha
Helix 8
AA8
A
251 273Right-handed alpha
Helix 9
AA9
A
275 279Right-handed 310
Helix 10
AB1
A
296 300Right-handed 310
Helix 11
AB2
A
304 311Right-handed alpha
Helix 12
AB3
A
312 315Right-handed 310
Helix 13
AB4
A
349 353Right-handed 310
Helix 14
AB5
A
358 371Right-handed alpha
Helix 15
AB6
A
374 386Right-handed alpha
Helix 16
AB7
A
387 389Right-handed 310
Helix 17
AB8
A
390 399Right-handed alpha
Helix 18
AB9
A
402 430Right-handed alpha
Helix 19
AC1
A
719 737Right-handed alpha
Helix 20
AC2
A
743 772Right-handed alpha
Helix 21
AC3
A
773 778Right-handed alpha
Helix 22
AC4
A
780 798Right-handed alpha
Helix 23
AC5
A
806 808Right-handed 310
Helix 24
AC6
A
809 814Right-handed alpha
Helix 25
AC7
A
815 822Right-handed 310
Helix 26
AC8
A
823 837Right-handed alpha
Helix 27
AC9
A
840 869Right-handed alpha
Helix 28
AD1
A
869 874Right-handed alpha
Helix 29
AD2
A
886 900Right-handed alpha
Helix 30
AD3
A
903 913Right-handed alpha
Helix 31
AD4
A
914 945Right-handed alpha
Helix 32
AD5
A
1194 1206Right-handed alpha
Helix 33
AD6
A
1206 1225Right-handed alpha
Helix 34
AD7
A
1235 1270Right-handed alpha
Helix 35
AD8
A
1271 1292Right-handed alpha
Helix 36
AD9
A
1302 1306Right-handed alpha
Helix 37
AE1
A
1307 1316Right-handed 310
Helix 38
AE2
A
1319 1359Right-handed alpha
Helix 39
AE3
A
1382 1389Right-handed alpha
Helix 40
AE4
A
1407 1419Right-handed alpha
Helix 41
AE5
A
1422 1431Right-handed alpha
Helix 42
AE6
A
1447 1459Right-handed alpha
Helix 43
AE7
A
1460 1482Right-handed alpha
Helix 44
AE8
A
1490 1505Right-handed alpha
Helix 45
AE9
A
1521 1528Right-handed alpha
Helix 46
AF1
A
1529 1549Right-handed alpha
Helix 47
AF2
A
1555 1582Right-handed alpha
Helix 48
AF3
A
1585 1591Right-handed alpha
Helix 49
AF4
A
1591 1612Right-handed alpha
Helix 50
AF5
A
1623 1630Right-handed alpha
Helix 51
AF6
A
1631 1641Right-handed 310
Helix 52
AF7
A
1643 1681Right-handed alpha
Helix 53
AF8
A
1698 1711Right-handed alpha
Helix 54
AF9
A
1714 1724Right-handed alpha
Helix 55
AG1
A
1746 1780Right-handed alpha
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There are 2 sheets in PDB entry 8F6P. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 283first strand
Strand 2
A
340 343anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1363 1367first strand
Strand 2
A
1395 1399anti-parallel
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