Analysis of interatomic Contacts of Structural Units in PDB entry:
8F6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8F6T entry

There is 1 chain in PDB entry 8F6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 13ALA 467
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 8F6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 25Right-handed 310
Helix 2
AA2
A
26 42Right-handed alpha
Helix 3
AA3
A
43 48Right-handed 310
Helix 4
AA4
A
50 56Right-handed alpha
Helix 5
AA5
A
57 65Right-handed alpha
Helix 6
AA6
A
73 81Right-handed alpha
Helix 7
AA7
A
84 92Right-handed alpha
Helix 8
AA8
A
93 111Right-handed alpha
Helix 9
AA9
A
114 141Right-handed alpha
Helix 10
AB1
A
144 155Right-handed alpha
Helix 11
AB2
A
162 170Right-handed alpha
Helix 12
AB3
A
189 192Right-handed 310
Helix 13
AB4
A
193 216Right-handed alpha
Helix 14
AB5
A
225 245Right-handed alpha
Helix 15
AB6
A
246 272Right-handed alpha
Helix 16
AB7
A
289 293Right-handed 310
Helix 17
AB8
A
298 305Right-handed alpha
Helix 18
AB9
A
312 317Right-handed alpha
Helix 19
AC1
A
321 325Right-handed 310
Helix 20
AC2
A
342 347Right-handed alpha
Helix 21
AC3
A
347 363Right-handed alpha
Helix 22
AC4
A
373 375Right-handed 310
Helix 23
AC5
A
376 385Right-handed alpha
Helix 24
AC6
A
441 445Right-handed 310
Helix 25
AC7
A
458 462Right-handed 310
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There is 1 sheet (AA1) in PDB entry 8F6T.

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 425first strand
Strand 2
A
416 417anti-parallel
Strand 3
A
463 464anti-parallel
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