Analysis of interatomic Contacts of Structural Units in PDB entry:
8F73

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8F73 entry

There are 8 chains in PDB entry 8F73 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 1	THR 275
B	ALA -5	THR 275
C	SER 1	THR 275
D	SER 1	THR 275
E	ALA -5	THR 275
F	SER 1	THR 275
G	SER 1	THR 275
H	ILE 2	THR 275

There are123 helices in PDB entry 8F73. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	17	Right-handed 310
Helix 2	AA2	A	24	27	Right-handed 310
Helix 3	AA3	A	35	46	Right-handed alpha
Helix 4	AA4	A	58	67	Right-handed alpha
Helix 5	AA5	A	69	75	Right-handed alpha
Helix 6	AA6	A	85	95	Right-handed alpha
Helix 7	AA7	A	107	115	Right-handed alpha
Helix 8	AA8	A	115	120	Right-handed alpha
Helix 9	AA9	A	140	153	Right-handed alpha
Helix 10	AB1	A	163	169	Right-handed 310
Helix 11	AB2	A	193	197	Right-handed 310
Helix 12	AB3	A	212	219	Right-handed alpha
Helix 13	AB4	A	223	227	Right-handed 310
Helix 14	AB5	A	229	241	Right-handed alpha
Helix 15	AB6	A	257	272	Right-handed alpha
Helix 16	AB7	B	13	15	Right-handed 310
Helix 17	AB8	B	16	21	Right-handed alpha
Helix 18	AB9	B	22	23	Right-handed 310
Helix 19	AC1	B	24	27	Right-handed 310
Helix 20	AC2	B	35	46	Right-handed alpha
Helix 21	AC3	B	58	67	Right-handed alpha
Helix 22	AC4	B	69	75	Right-handed alpha
Helix 23	AC5	B	85	95	Right-handed alpha
Helix 24	AC6	B	107	115	Right-handed alpha
Helix 25	AC7	B	115	120	Right-handed alpha
Helix 26	AC8	B	140	153	Right-handed alpha
Helix 27	AC9	B	163	169	Right-handed 310
Helix 28	AD1	B	193	197	Right-handed 310
Helix 29	AD2	B	211	219	Right-handed alpha
Helix 30	AD3	B	223	227	Right-handed 310
Helix 31	AD4	B	229	241	Right-handed alpha
Helix 32	AD5	B	257	272	Right-handed alpha
Helix 33	AD6	C	13	17	Right-handed 310
Helix 34	AD7	C	18	22	Right-handed 310
Helix 35	AD8	C	24	27	Right-handed 310
Helix 36	AD9	C	35	46	Right-handed alpha
Helix 37	AE1	C	58	67	Right-handed alpha
Helix 38	AE2	C	69	76	Right-handed alpha
Helix 39	AE3	C	81	84	Right-handed 310
Helix 40	AE4	C	85	95	Right-handed alpha
Helix 41	AE5	C	107	115	Right-handed alpha
Helix 42	AE6	C	115	120	Right-handed alpha
Helix 43	AE7	C	140	153	Right-handed alpha
Helix 44	AE8	C	163	169	Right-handed 310
Helix 45	AE9	C	212	220	Right-handed alpha
Helix 46	AF1	C	223	227	Right-handed 310
Helix 47	AF2	C	229	241	Right-handed alpha
Helix 48	AF3	C	257	272	Right-handed alpha
Helix 49	AF4	D	13	17	Right-handed 310
Helix 50	AF5	D	18	22	Right-handed 310
Helix 51	AF6	D	24	27	Right-handed 310
Helix 52	AF7	D	35	46	Right-handed alpha
Helix 53	AF8	D	58	66	Right-handed alpha
Helix 54	AF9	D	69	76	Right-handed alpha
Helix 55	AG1	D	85	95	Right-handed alpha
Helix 56	AG2	D	107	115	Right-handed alpha
Helix 57	AG3	D	115	120	Right-handed alpha
Helix 58	AG4	D	140	153	Right-handed alpha
Helix 59	AG5	D	163	167	Right-handed 310
Helix 60	AG6	D	211	220	Right-handed alpha
Helix 61	AG7	D	223	227	Right-handed 310
Helix 62	AG8	D	229	240	Right-handed alpha
Helix 63	AG9	D	257	272	Right-handed alpha
Helix 64	AH1	E	13	17	Right-handed 310
Helix 65	AH2	E	24	27	Right-handed 310
Helix 66	AH3	E	35	46	Right-handed alpha
Helix 67	AH4	E	58	67	Right-handed alpha
Helix 68	AH5	E	69	76	Right-handed alpha
Helix 69	AH6	E	81	95	Right-handed alpha
Helix 70	AH7	E	107	115	Right-handed alpha
Helix 71	AH8	E	115	120	Right-handed alpha
Helix 72	AH9	E	140	153	Right-handed alpha
Helix 73	AI1	E	163	169	Right-handed 310
Helix 74	AI2	E	193	197	Right-handed 310
Helix 75	AI3	E	211	219	Right-handed alpha
Helix 76	AI4	E	223	227	Right-handed 310
Helix 77	AI5	E	229	241	Right-handed alpha
Helix 78	AI6	E	257	272	Right-handed alpha
Helix 79	AI7	F	18	22	Right-handed 310
Helix 80	AI8	F	24	27	Right-handed 310
Helix 81	AI9	F	35	46	Right-handed alpha
Helix 82	AJ1	F	58	67	Right-handed alpha
Helix 83	AJ2	F	69	76	Right-handed alpha
Helix 84	AJ3	F	81	84	Right-handed 310
Helix 85	AJ4	F	85	95	Right-handed alpha
Helix 86	AJ5	F	107	115	Right-handed alpha
Helix 87	AJ6	F	115	120	Right-handed alpha
Helix 88	AJ7	F	140	153	Right-handed alpha
Helix 89	AJ8	F	163	169	Right-handed 310
Helix 90	AJ9	F	212	219	Right-handed alpha
Helix 91	AK1	F	223	227	Right-handed 310
Helix 92	AK2	F	229	241	Right-handed alpha
Helix 93	AK3	F	257	272	Right-handed alpha
Helix 94	AK4	G	13	17	Right-handed 310
Helix 95	AK5	G	24	27	Right-handed 310
Helix 96	AK6	G	35	46	Right-handed alpha
Helix 97	AK7	G	58	67	Right-handed alpha
Helix 98	AK8	G	69	76	Right-handed alpha
Helix 99	AK9	G	81	84	Right-handed 310
Helix 100	AL1	G	85	95	Right-handed alpha
Helix 101	AL2	G	107	115	Right-handed alpha
Helix 102	AL3	G	115	120	Right-handed alpha
Helix 103	AL4	G	140	153	Right-handed alpha
Helix 104	AL5	G	163	169	Right-handed 310
Helix 105	AL6	G	212	220	Right-handed alpha
Helix 106	AL7	G	223	227	Right-handed 310
Helix 107	AL8	G	229	241	Right-handed alpha
Helix 108	AL9	G	257	272	Right-handed alpha
Helix 109	AM1	H	13	17	Right-handed 310
Helix 110	AM2	H	18	22	Right-handed 310
Helix 111	AM3	H	24	27	Right-handed 310
Helix 112	AM4	H	35	46	Right-handed alpha
Helix 113	AM5	H	58	66	Right-handed alpha
Helix 114	AM6	H	69	76	Right-handed alpha
Helix 115	AM7	H	85	95	Right-handed alpha
Helix 116	AM8	H	107	115	Right-handed alpha
Helix 117	AM9	H	115	120	Right-handed alpha
Helix 118	AN1	H	140	153	Right-handed alpha
Helix 119	AN2	H	163	169	Right-handed 310
Helix 120	AN3	H	212	218	Right-handed alpha
Helix 121	AN4	H	223	227	Right-handed 310
Helix 122	AN5	H	229	241	Right-handed alpha
Helix 123	AN6	H	257	272	Right-handed alpha

There are 22 sheets in PDB entry 8F73. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 20 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	201	209	first strand
Strand 2	A	155	161	anti-parallel
Strand 3	A	243	247	parallel
Strand 4	A	182	190	anti-parallel
Strand 5	A	171	177	anti-parallel
Strand 6	A	201	209	anti-parallel
Strand 7	A	124	127	anti-parallel
Strand 8	A	4	9	parallel
Strand 9	A	50	55	parallel
Strand 10	A	96	101	parallel
Strand 11	H	96	101	anti-parallel
Strand 12	H	50	55	parallel
Strand 13	H	4	9	parallel
Strand 14	H	124	127	parallel
Strand 15	H	201	209	anti-parallel
Strand 16	H	171	177	anti-parallel
Strand 17	H	182	190	anti-parallel
Strand 18	H	243	247	anti-parallel
Strand 19	H	155	161	parallel
Strand 20	H	201	209	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	30	first strand
Strand 2	A	33	34	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	134	first strand
Strand 2	A	251	254	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	101	first strand
Strand 2	B	50	55	parallel
Strand 3	B	4	9	parallel
Strand 4	B	124	127	parallel
Strand 5	B	201	209	anti-parallel
Strand 6	B	171	179	anti-parallel
Strand 7	B	182	190	anti-parallel
Strand 8	B	243	247	anti-parallel
Strand 9	B	155	161	parallel
Strand 10	B	201	209	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	30	first strand
Strand 2	B	33	34	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	134	first strand
Strand 2	B	251	254	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	182	184	first strand
Strand 2	C	243	247	anti-parallel
Strand 3	C	155	161	parallel
Strand 4	C	201	209	anti-parallel
Strand 5	C	171	174	anti-parallel
Strand 6	C	187	190	anti-parallel

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There are 17 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	182	184	first strand
Strand 2	C	243	247	anti-parallel
Strand 3	C	155	161	parallel
Strand 4	C	201	209	anti-parallel
Strand 5	C	124	127	anti-parallel
Strand 6	C	4	9	parallel
Strand 7	C	50	55	parallel
Strand 8	C	96	101	parallel
Strand 9	G	96	101	anti-parallel
Strand 10	G	50	55	parallel
Strand 11	G	4	9	parallel
Strand 12	G	124	127	parallel
Strand 13	G	206	209	anti-parallel
Strand 14	G	155	159	anti-parallel
Strand 15	G	243	247	parallel
Strand 16	G	182	190	anti-parallel
Strand 17	G	171	177	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	30	first strand
Strand 2	C	33	34	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	134	first strand
Strand 2	C	251	254	anti-parallel

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There are 20 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	201	209	first strand
Strand 2	D	155	161	anti-parallel
Strand 3	D	243	247	parallel
Strand 4	D	182	190	anti-parallel
Strand 5	D	171	177	anti-parallel
Strand 6	D	201	209	anti-parallel
Strand 7	D	124	127	anti-parallel
Strand 8	D	4	9	parallel
Strand 9	D	50	55	parallel
Strand 10	D	96	101	parallel
Strand 11	E	96	101	anti-parallel
Strand 12	E	50	55	parallel
Strand 13	E	4	9	parallel
Strand 14	E	124	127	parallel
Strand 15	E	201	209	anti-parallel
Strand 16	E	171	179	anti-parallel
Strand 17	E	182	190	anti-parallel
Strand 18	E	243	247	anti-parallel
Strand 19	E	155	161	parallel
Strand 20	E	201	209	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	30	first strand
Strand 2	D	33	34	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	134	first strand
Strand 2	D	251	254	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	30	first strand
Strand 2	E	33	34	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	134	first strand
Strand 2	E	251	254	anti-parallel

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There are 10 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	96	101	first strand
Strand 2	F	50	55	parallel
Strand 3	F	4	9	parallel
Strand 4	F	124	127	parallel
Strand 5	F	201	209	anti-parallel
Strand 6	F	171	179	anti-parallel
Strand 7	F	182	190	anti-parallel
Strand 8	F	243	247	anti-parallel
Strand 9	F	155	161	parallel
Strand 10	F	201	209	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	30	first strand
Strand 2	F	33	34	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	131	134	first strand
Strand 2	F	251	254	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	30	first strand
Strand 2	G	33	34	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	131	134	first strand
Strand 2	G	251	254	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	29	30	first strand
Strand 2	H	33	34	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	131	134	first strand
Strand 2	H	251	254	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8F73

Analysis of interatomic Contacts of Structural Units in PDB entry:
8F73