Analysis of interatomic Contacts of Structural Units in PDB entry:
8F74

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8F74 entry

There are 6 chains in PDB entry 8F74 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 15	GLU 410
B	PRO 15	GLU 410
C	PRO 15	LEU 402
D	PRO 15	ASN 408
E	PRO 15	ASN 409
F	ALA 16	GLU 408

There are 90 helices in PDB entry 8F74. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	21	Right-handed 310
Helix 2	AA2	A	22	50	Right-handed alpha
Helix 3	AA3	A	102	117	Right-handed alpha
Helix 4	AA4	A	119	141	Right-handed alpha
Helix 5	AA5	A	141	146	Right-handed alpha
Helix 6	AA6	A	146	165	Right-handed alpha
Helix 7	AA7	A	166	175	Right-handed alpha
Helix 8	AA8	A	233	256	Right-handed alpha
Helix 9	AA9	A	258	285	Right-handed alpha
Helix 10	AB1	A	286	289	Right-handed 310
Helix 11	AB2	A	315	346	Right-handed alpha
Helix 12	AB3	A	353	360	Right-handed alpha
Helix 13	AB4	A	369	383	Right-handed alpha
Helix 14	AB5	A	383	392	Right-handed alpha
Helix 15	AB6	A	395	410	Right-handed alpha
Helix 16	AB7	B	15	21	Right-handed 310
Helix 17	AB8	B	22	50	Right-handed alpha
Helix 18	AB9	B	102	117	Right-handed alpha
Helix 19	AC1	B	119	146	Right-handed alpha
Helix 20	AC2	B	146	166	Right-handed alpha
Helix 21	AC3	B	166	175	Right-handed alpha
Helix 22	AC4	B	233	255	Right-handed alpha
Helix 23	AC5	B	258	286	Right-handed alpha
Helix 24	AC6	B	287	289	Right-handed 310
Helix 25	AC7	B	314	343	Right-handed alpha
Helix 26	AC8	B	353	360	Right-handed alpha
Helix 27	AC9	B	370	383	Right-handed alpha
Helix 28	AD1	B	383	391	Right-handed alpha
Helix 29	AD2	B	392	394	Right-handed 310
Helix 30	AD3	B	395	410	Right-handed alpha
Helix 31	AD4	C	17	21	Right-handed 310
Helix 32	AD5	C	22	50	Right-handed alpha
Helix 33	AD6	C	102	117	Right-handed alpha
Helix 34	AD7	C	119	146	Right-handed alpha
Helix 35	AD8	C	146	165	Right-handed alpha
Helix 36	AD9	C	167	175	Right-handed alpha
Helix 37	AE1	C	236	255	Right-handed alpha
Helix 38	AE2	C	258	286	Right-handed alpha
Helix 39	AE3	C	287	289	Right-handed 310
Helix 40	AE4	C	315	344	Right-handed alpha
Helix 41	AE5	C	353	360	Right-handed alpha
Helix 42	AE6	C	370	383	Right-handed alpha
Helix 43	AE7	C	383	391	Right-handed alpha
Helix 44	AE8	C	392	394	Right-handed 310
Helix 45	AE9	C	395	402	Right-handed alpha
Helix 46	AF1	D	15	21	Right-handed 310
Helix 47	AF2	D	22	49	Right-handed alpha
Helix 48	AF3	D	102	117	Right-handed alpha
Helix 49	AF4	D	119	142	Right-handed alpha
Helix 50	AF5	D	146	165	Right-handed alpha
Helix 51	AF6	D	166	175	Right-handed alpha
Helix 52	AF7	D	233	256	Right-handed alpha
Helix 53	AF8	D	258	286	Right-handed alpha
Helix 54	AF9	D	287	289	Right-handed 310
Helix 55	AG1	D	315	346	Right-handed alpha
Helix 56	AG2	D	353	360	Right-handed alpha
Helix 57	AG3	D	370	383	Right-handed alpha
Helix 58	AG4	D	383	391	Right-handed alpha
Helix 59	AG5	D	392	394	Right-handed 310
Helix 60	AG6	D	395	408	Right-handed alpha
Helix 61	AG7	E	17	21	Right-handed 310
Helix 62	AG8	E	22	50	Right-handed alpha
Helix 63	AG9	E	102	117	Right-handed alpha
Helix 64	AH1	E	119	146	Right-handed alpha
Helix 65	AH2	E	146	166	Right-handed alpha
Helix 66	AH3	E	166	175	Right-handed alpha
Helix 67	AH4	E	233	255	Right-handed alpha
Helix 68	AH5	E	258	286	Right-handed alpha
Helix 69	AH6	E	287	289	Right-handed 310
Helix 70	AH7	E	315	345	Right-handed alpha
Helix 71	AH8	E	353	360	Right-handed alpha
Helix 72	AH9	E	370	383	Right-handed alpha
Helix 73	AI1	E	383	391	Right-handed alpha
Helix 74	AI2	E	392	394	Right-handed 310
Helix 75	AI3	E	395	409	Right-handed alpha
Helix 76	AI4	F	22	49	Right-handed alpha
Helix 77	AI5	F	104	119	Right-handed alpha
Helix 78	AI6	F	121	143	Right-handed alpha
Helix 79	AI7	F	143	148	Right-handed alpha
Helix 80	AI8	F	148	168	Right-handed alpha
Helix 81	AI9	F	168	179	Right-handed alpha
Helix 82	AJ1	F	233	253	Right-handed alpha
Helix 83	AJ2	F	257	284	Right-handed alpha
Helix 84	AJ3	F	297	302	Right-handed alpha
Helix 85	AJ4	F	312	344	Right-handed alpha
Helix 86	AJ5	F	351	358	Right-handed alpha
Helix 87	AJ6	F	368	381	Right-handed alpha
Helix 88	AJ7	F	381	389	Right-handed alpha
Helix 89	AJ8	F	390	392	Right-handed 310
Helix 90	AJ9	F	393	408	Right-handed alpha

There are 12 sheets in PDB entry 8F74. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	56	first strand
Strand 2	A	307	311	anti-parallel
Strand 3	A	292	296	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	60	first strand
Strand 2	F	94	95	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	307	311	anti-parallel
Strand 3	B	292	296	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	350	351	first strand
Strand 2	B	368	369	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	56	first strand
Strand 2	C	307	311	anti-parallel
Strand 3	C	292	296	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	350	351	first strand
Strand 2	C	368	369	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	56	first strand
Strand 2	D	307	311	anti-parallel
Strand 3	D	292	296	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	350	351	first strand
Strand 2	D	368	369	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	56	first strand
Strand 2	E	307	311	anti-parallel
Strand 3	E	292	296	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	350	351	first strand
Strand 2	E	368	369	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	52	56	first strand
Strand 2	F	306	310	anti-parallel
Strand 3	F	290	293	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	348	349	first strand
Strand 2	F	366	367	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8F74

Analysis of interatomic Contacts of Structural Units in PDB entry:
8F74