Analysis of interatomic Contacts of Structural Units in PDB entry:
8F7A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8F7A entry

There are 2 chains in PDB entry 8F7A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 23THR 724
B
 VAL 10PHE 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 8F7A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 34Right-handed alpha
Helix 2
AA2
A
36 51Right-handed alpha
Helix 3
AA3
A
55 66Right-handed alpha
Helix 4
AA4
A
70 88Right-handed alpha
Helix 5
AA5
A
102 113Right-handed alpha
Helix 6
AA6
A
121 139Right-handed alpha
Helix 7
AA7
A
147 155Right-handed alpha
Helix 8
AA8
A
161 177Right-handed alpha
Helix 9
AA9
A
181 199Right-handed alpha
Helix 10
AB1
A
204 229Right-handed alpha
Helix 11
AB2
A
237 250Right-handed alpha
Helix 12
AB3
A
261 279Right-handed alpha
Helix 13
AB4
A
279 284Right-handed alpha
Helix 14
AB5
A
286 309Right-handed alpha
Helix 15
AB6
A
329 344Right-handed alpha
Helix 16
AB7
A
346 356Right-handed alpha
Helix 17
AB8
A
356 368Right-handed alpha
Helix 18
AB9
A
371 381Right-handed alpha
Helix 19
AC1
A
381 389Right-handed alpha
Helix 20
AC2
A
397 413Right-handed alpha
Helix 21
AC3
A
413 438Right-handed alpha
Helix 22
AC4
A
443 456Right-handed alpha
Helix 23
AC5
A
457 467Right-handed alpha
Helix 24
AC6
A
473 481Right-handed alpha
Helix 25
AC7
A
483 487Right-handed 310
Helix 26
AC8
A
491 505Right-handed alpha
Helix 27
AC9
A
506 508Right-handed 310
Helix 28
AD1
A
510 523Right-handed alpha
Helix 29
AD2
A
524 526Right-handed 310
Helix 30
AD3
A
530 552Right-handed alpha
Helix 31
AD4
A
553 559Right-handed 310
Helix 32
AD5
A
560 573Right-handed alpha
Helix 33
AD6
A
577 594Right-handed alpha
Helix 34
AD7
A
594 616Right-handed alpha
Helix 35
AD8
A
619 635Right-handed alpha
Helix 36
AD9
A
636 638Right-handed 310
Helix 37
AE1
A
639 657Right-handed alpha
Helix 38
AE2
A
665 680Right-handed alpha
Helix 39
AE3
A
686 692Right-handed alpha
Helix 40
AE4
A
692 704Right-handed alpha
Helix 41
AE5
A
706 721Right-handed alpha
Helix 42
AE6
B
25 34Right-handed alpha
Helix 43
AE7
B
97 102Right-handed alpha
Helix 44
AE8
B
102 114Right-handed alpha
Helix 45
AE9
B
160 172Right-handed alpha
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There are 2 sheets in PDB entry 8F7A. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
59 68parallel
Strand 3
B
47 50anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
59 68parallel
Strand 3
B
53 56anti-parallel
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