Analysis of interatomic Contacts of Structural Units in PDB entry:
8F7C

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8F7C entry

There are 7 chains in PDB entry 8F7C (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 35	THR 368
B	GLY 35	THR 368
C	GLY 35	THR 368
D	GLY 35	THR 368
E	GLY 35	THR 368
F	GLY 35	THR 368
G	GLY 35	THR 368

There are117 helices in PDB entry 8F7C. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	41	Right-handed alpha
Helix 2	AA2	A	48	59	Right-handed alpha
Helix 3	AA3	A	59	74	Right-handed alpha
Helix 4	AA4	A	88	103	Right-handed alpha
Helix 5	AA5	A	111	115	Right-handed 310
Helix 6	AA6	A	119	147	Right-handed alpha
Helix 7	AA7	A	148	164	Right-handed alpha
Helix 8	AA8	A	209	218	Right-handed alpha
Helix 9	AA9	A	221	238	Right-handed alpha
Helix 10	AB1	A	238	250	Right-handed alpha
Helix 11	AB2	A	286	314	Right-handed alpha
Helix 12	AB3	A	319	324	Right-handed alpha
Helix 13	AB4	A	329	332	Right-handed 310
Helix 14	AB5	A	333	339	Right-handed alpha
Helix 15	AB6	A	342	354	Right-handed alpha
Helix 16	AB7	A	355	358	Right-handed 310
Helix 17	AB8	A	360	368	Right-handed alpha
Helix 18	AB9	B	36	41	Right-handed alpha
Helix 19	AC1	B	48	59	Right-handed alpha
Helix 20	AC2	B	59	74	Right-handed alpha
Helix 21	AC3	B	88	103	Right-handed alpha
Helix 22	AC4	B	111	115	Right-handed 310
Helix 23	AC5	B	118	147	Right-handed alpha
Helix 24	AC6	B	148	164	Right-handed alpha
Helix 25	AC7	B	209	218	Right-handed alpha
Helix 26	AC8	B	221	238	Right-handed alpha
Helix 27	AC9	B	238	250	Right-handed alpha
Helix 28	AD1	B	286	314	Right-handed alpha
Helix 29	AD2	B	319	324	Right-handed alpha
Helix 30	AD3	B	330	339	Right-handed alpha
Helix 31	AD4	B	342	354	Right-handed alpha
Helix 32	AD5	B	355	358	Right-handed 310
Helix 33	AD6	B	360	368	Right-handed alpha
Helix 34	AD7	C	36	41	Right-handed alpha
Helix 35	AD8	C	48	59	Right-handed alpha
Helix 36	AD9	C	59	74	Right-handed alpha
Helix 37	AE1	C	88	103	Right-handed alpha
Helix 38	AE2	C	111	115	Right-handed 310
Helix 39	AE3	C	119	147	Right-handed alpha
Helix 40	AE4	C	148	164	Right-handed alpha
Helix 41	AE5	C	209	219	Right-handed alpha
Helix 42	AE6	C	221	238	Right-handed alpha
Helix 43	AE7	C	238	250	Right-handed alpha
Helix 44	AE8	C	286	314	Right-handed alpha
Helix 45	AE9	C	319	324	Right-handed alpha
Helix 46	AF1	C	329	339	Right-handed alpha
Helix 47	AF2	C	342	354	Right-handed alpha
Helix 48	AF3	C	355	358	Right-handed 310
Helix 49	AF4	C	360	368	Right-handed alpha
Helix 50	AF5	D	36	41	Right-handed alpha
Helix 51	AF6	D	48	59	Right-handed alpha
Helix 52	AF7	D	59	74	Right-handed alpha
Helix 53	AF8	D	88	103	Right-handed alpha
Helix 54	AF9	D	111	115	Right-handed 310
Helix 55	AG1	D	118	147	Right-handed alpha
Helix 56	AG2	D	148	164	Right-handed alpha
Helix 57	AG3	D	209	218	Right-handed alpha
Helix 58	AG4	D	221	238	Right-handed alpha
Helix 59	AG5	D	238	250	Right-handed alpha
Helix 60	AG6	D	286	314	Right-handed alpha
Helix 61	AG7	D	319	324	Right-handed alpha
Helix 62	AG8	D	329	331	Right-handed 310
Helix 63	AG9	D	332	339	Right-handed alpha
Helix 64	AH1	D	342	354	Right-handed alpha
Helix 65	AH2	D	355	358	Right-handed 310
Helix 66	AH3	D	360	368	Right-handed alpha
Helix 67	AH4	E	36	41	Right-handed alpha
Helix 68	AH5	E	48	59	Right-handed alpha
Helix 69	AH6	E	59	74	Right-handed alpha
Helix 70	AH7	E	88	103	Right-handed alpha
Helix 71	AH8	E	111	115	Right-handed 310
Helix 72	AH9	E	119	147	Right-handed alpha
Helix 73	AI1	E	148	161	Right-handed alpha
Helix 74	AI2	E	162	166	Right-handed 310
Helix 75	AI3	E	209	218	Right-handed alpha
Helix 76	AI4	E	221	238	Right-handed alpha
Helix 77	AI5	E	238	250	Right-handed alpha
Helix 78	AI6	E	286	314	Right-handed alpha
Helix 79	AI7	E	319	326	Right-handed alpha
Helix 80	AI8	E	330	339	Right-handed alpha
Helix 81	AI9	E	342	354	Right-handed alpha
Helix 82	AJ1	E	355	358	Right-handed 310
Helix 83	AJ2	E	360	368	Right-handed alpha
Helix 84	AJ3	F	36	41	Right-handed alpha
Helix 85	AJ4	F	48	59	Right-handed alpha
Helix 86	AJ5	F	59	74	Right-handed alpha
Helix 87	AJ6	F	88	103	Right-handed alpha
Helix 88	AJ7	F	111	115	Right-handed 310
Helix 89	AJ8	F	119	135	Right-handed alpha
Helix 90	AJ9	F	136	147	Right-handed alpha
Helix 91	AK1	F	148	160	Right-handed alpha
Helix 92	AK2	F	160	166	Right-handed alpha
Helix 93	AK3	F	209	218	Right-handed alpha
Helix 94	AK4	F	221	238	Right-handed alpha
Helix 95	AK5	F	238	250	Right-handed alpha
Helix 96	AK6	F	286	314	Right-handed alpha
Helix 97	AK7	F	319	326	Right-handed alpha
Helix 98	AK8	F	330	339	Right-handed alpha
Helix 99	AK9	F	342	354	Right-handed alpha
Helix 100	AL1	F	355	358	Right-handed 310
Helix 101	AL2	F	360	368	Right-handed alpha
Helix 102	AL3	G	36	41	Right-handed alpha
Helix 103	AL4	G	48	59	Right-handed alpha
Helix 104	AL5	G	59	74	Right-handed alpha
Helix 105	AL6	G	88	103	Right-handed alpha
Helix 106	AL7	G	111	115	Right-handed 310
Helix 107	AL8	G	118	147	Right-handed alpha
Helix 108	AL9	G	148	164	Right-handed alpha
Helix 109	AM1	G	209	218	Right-handed alpha
Helix 110	AM2	G	221	238	Right-handed alpha
Helix 111	AM3	G	238	250	Right-handed alpha
Helix 112	AM4	G	286	314	Right-handed alpha
Helix 113	AM5	G	319	324	Right-handed alpha
Helix 114	AM6	G	330	339	Right-handed alpha
Helix 115	AM7	G	342	354	Right-handed alpha
Helix 116	AM8	G	355	358	Right-handed 310
Helix 117	AM9	G	360	368	Right-handed alpha

There are 7 sheets in PDB entry 8F7C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	81	first strand
Strand 2	A	277	280	anti-parallel
Strand 3	A	256	259	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	80	81	first strand
Strand 2	B	277	280	anti-parallel
Strand 3	B	256	259	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	80	81	first strand
Strand 2	C	277	280	anti-parallel
Strand 3	C	256	259	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	80	81	first strand
Strand 2	D	277	280	anti-parallel
Strand 3	D	256	259	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	80	81	first strand
Strand 2	E	277	280	anti-parallel
Strand 3	E	256	259	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	80	81	first strand
Strand 2	F	277	280	anti-parallel
Strand 3	F	256	259	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	80	81	first strand
Strand 2	G	277	280	anti-parallel
Strand 3	G	258	259	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8F7C

Analysis of interatomic Contacts of Structural Units in PDB entry:
8F7C