Analysis of interatomic Contacts of Structural Units in PDB entry:
8F7X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8F7X entry

There are 6 chains in PDB entry 8F7X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
R
 GLY 49PHE 333
P
 PHE 1LEU 14
A
 THR 4PHE 354
B
 GLN 6ASN 340
C
 ILE 9LYS 64
E
 VAL 2LEU 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8F7X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
R
49 78Right-handed alpha
Helix 2
AA2
R
84 102Right-handed alpha
Helix 3
AA3
R
103 114Right-handed alpha
Helix 4
AA4
R
119 154Right-handed alpha
Helix 5
AA5
R
157 162Right-handed alpha
Helix 6
AA6
R
163 189Right-handed alpha
Helix 7
AA7
R
207 245Right-handed alpha
Helix 8
AA8
R
251 288Right-handed alpha
Helix 9
AA9
R
294 320Right-handed alpha
Helix 10
AB1
R
323 333Right-handed alpha
Helix 11
AB2
P
6 14Right-handed alpha
Helix 12
AB3
A
6 32Right-handed alpha
Helix 13
AB4
A
42 44Right-handed 310
Helix 14
AB5
A
45 54Right-handed alpha
Helix 15
AB6
A
241 255Right-handed alpha
Helix 16
AB7
A
271 281Right-handed alpha
Helix 17
AB8
A
282 286Right-handed 310
Helix 18
AB9
A
295 310Right-handed alpha
Helix 19
AC1
A
327 352Right-handed alpha
Helix 20
AC2
B
7 24Right-handed alpha
Helix 21
AC3
B
29 34Right-handed alpha
Helix 22
AC4
C
10 25Right-handed alpha
Helix 23
AC5
C
29 44Right-handed alpha
Helix 24
AC6
E
28 32Right-handed 310
Helix 25
AC7
E
53 56Right-handed 310
Helix 26
AC8
E
221 225Right-handed 310
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There are 14 sheets in PDB entry 8F7X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
190 193first strand
Strand 2
R
198 201anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 190first strand
Strand 2
A
195 200anti-parallel
Strand 3
A
34 40parallel
Strand 4
A
220 225parallel
Strand 5
A
263 268parallel
Strand 6
A
319 323parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 51first strand
Strand 2
B
336 340anti-parallel
Strand 3
B
327 331anti-parallel
Strand 4
B
315 320anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 63first strand
Strand 2
B
69 74anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
88 94anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 105first strand
Strand 2
B
111 116anti-parallel
Strand 3
B
121 125anti-parallel
Strand 4
B
134 139anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 151first strand
Strand 2
B
156 161anti-parallel
Strand 3
B
165 170anti-parallel
Strand 4
B
176 180anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 192first strand
Strand 2
B
199 203anti-parallel
Strand 3
B
207 210anti-parallel
Strand 4
B
220 223anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 234first strand
Strand 2
B
240 245anti-parallel
Strand 3
B
249 254anti-parallel
Strand 4
B
260 265anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
273 278first strand
Strand 2
B
284 289anti-parallel
Strand 3
B
294 298anti-parallel
Strand 4
B
304 308anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 7first strand
Strand 2
E
18 25anti-parallel
Strand 3
E
78 83anti-parallel
Strand 4
E
69 73anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
58 60first strand
Strand 2
E
45 51anti-parallel
Strand 3
E
33 39anti-parallel
Strand 4
E
93 99anti-parallel
Strand 5
E
110 111anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
58 60first strand
Strand 2
E
45 51anti-parallel
Strand 3
E
33 39anti-parallel
Strand 4
E
93 99anti-parallel
Strand 5
E
115 116anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
142 143first strand
Strand 2
E
156 161anti-parallel
Strand 3
E
213 217anti-parallel
Strand 4
E
204 207anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
147 149first strand
Strand 2
E
244 247parallel
Strand 3
E
226 232anti-parallel
Strand 4
E
175 180anti-parallel
Strand 5
E
187 191anti-parallel
Strand 6
E
195 196anti-parallel
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