Analysis of interatomic Contacts of Structural Units in PDB entry:
8F8L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8F8L entry

There is 1 chain in PDB entry 8F8L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 8F8L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 20Right-handed alpha
Helix 2
AA2
A
21 23Right-handed 310
Helix 3
AA3
A
24 40Right-handed alpha
Helix 4
AA4
A
44 56Right-handed alpha
Helix 5
AA5
A
63 89Right-handed alpha
Helix 6
AA6
A
98 110Right-handed alpha
Helix 7
AA7
A
115 147Right-handed alpha
Helix 8
AA8
A
148 179Right-handed alpha
Helix 9
AA9
A
183 195Right-handed alpha
Helix 10
AB1
A
195 200Right-handed alpha
Helix 11
AB2
A
200 212Right-handed alpha
Helix 12
AB3
A
214 243Right-handed alpha
Helix 13
AB4
A
244 249Right-handed alpha
Helix 14
AB5
A
253 259Right-handed alpha
Helix 15
AB6
A
262 276Right-handed alpha
Helix 16
AB7
A
276 285Right-handed alpha
Helix 17
AB8
A
292 306Right-handed alpha
Helix 18
AB9
A
307 329Right-handed alpha
Helix 19
AC1
A
333 344Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8F8L.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
96 97anti-parallel
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