Analysis of interatomic Contacts of Structural Units in PDB entry:
8FAC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FAC entry

There is 1 chain in PDB entry 8FAC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 341	LYS 2013

There are 46 helices in PDB entry 8FAC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	345	349	Right-handed 310
Helix 2	AA2	A	396	402	Right-handed alpha
Helix 3	AA3	A	443	448	Right-handed alpha
Helix 4	AA4	A	466	472	Right-handed 310
Helix 5	AA5	A	490	494	Right-handed 310
Helix 6	AA6	A	543	547	Right-handed 310
Helix 7	AA7	A	564	570	Right-handed 310
Helix 8	AA8	A	588	594	Right-handed 310
Helix 9	AA9	A	623	628	Right-handed alpha
Helix 10	AB1	A	652	660	Right-handed alpha
Helix 11	AB2	A	709	713	Right-handed 310
Helix 12	AB3	A	727	729	Right-handed 310
Helix 13	AB4	A	730	747	Right-handed alpha
Helix 14	AB5	A	766	783	Right-handed alpha
Helix 15	AB6	A	797	799	Right-handed 310
Helix 16	AB7	A	811	823	Right-handed alpha
Helix 17	AB8	A	844	865	Right-handed alpha
Helix 18	AB9	A	871	882	Right-handed alpha
Helix 19	AC1	A	889	902	Right-handed alpha
Helix 20	AC2	A	923	935	Right-handed alpha
Helix 21	AC3	A	941	945	Right-handed 310
Helix 22	AC4	A	967	972	Right-handed alpha
Helix 23	AC5	A	973	978	Right-handed alpha
Helix 24	AC6	A	992	995	Right-handed 310
Helix 25	AC7	A	1025	1046	Right-handed alpha
Helix 26	AC8	A	1133	1145	Right-handed alpha
Helix 27	AC9	A	1165	1170	Right-handed alpha
Helix 28	AD1	A	1190	1197	Right-handed alpha
Helix 29	AD2	A	1214	1219	Right-handed alpha
Helix 30	AD3	A	1220	1224	Right-handed 310
Helix 31	AD4	A	1243	1247	Right-handed 310
Helix 32	AD5	A	1289	1313	Right-handed alpha
Helix 33	AD6	A	1341	1350	Right-handed alpha
Helix 34	AD7	A	1359	1380	Right-handed alpha
Helix 35	AD8	A	1388	1392	Right-handed 310
Helix 36	AD9	A	1444	1459	Right-handed alpha
Helix 37	AE1	A	1486	1491	Right-handed alpha
Helix 38	AE2	A	1492	1501	Right-handed alpha
Helix 39	AE3	A	1512	1520	Right-handed alpha
Helix 40	AE4	A	1523	1527	Right-handed alpha
Helix 41	AE5	A	1556	1559	Right-handed 310
Helix 42	AE6	A	1670	1678	Right-handed alpha
Helix 43	AE7	A	1685	1689	Right-handed 310
Helix 44	AE8	A	1699	1702	Right-handed 310
Helix 45	AE9	A	1950	1957	Right-handed 310
Helix 46	AF1	A	1990	2010	Right-handed alpha

There are 19 sheets in PDB entry 8FAC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	358	first strand
Strand 2	A	384	386	parallel
Strand 3	A	408	410	parallel
Strand 4	A	429	431	parallel
Strand 5	A	454	456	parallel
Strand 6	A	477	479	parallel
Strand 7	A	501	503	parallel
Strand 8	A	552	554	parallel
Strand 9	A	575	577	parallel
Strand 10	A	599	600	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	675	681	first strand
Strand 2	A	692	698	anti-parallel
Strand 3	A	638	644	parallel
Strand 4	A	719	725	parallel
Strand 5	A	751	757	parallel
Strand 6	A	801	803	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	869	870	first strand
Strand 2	A	920	921	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	948	950	first strand
Strand 2	A	988	990	anti-parallel
Strand 3	A	983	984	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1118	1120	first strand
Strand 2	A	1014	1018	anti-parallel
Strand 3	A	1161	1164	anti-parallel
Strand 4	A	1187	1189	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1084	1085	first strand
Strand 2	A	1090	1094	anti-parallel
Strand 3	A	1097	1100	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1103	1105	first strand
Strand 2	A	1114	1116	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1239	1240	first strand
Strand 2	A	1256	1262	anti-parallel
Strand 3	A	1265	1271	anti-parallel
Strand 4	A	1331	1335	anti-parallel
Strand 5	A	1324	1326	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1393	1394	first strand
Strand 2	A	1405	1406	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1528	1536	first strand
Strand 2	A	1980	1987	anti-parallel
Strand 3	A	1969	1975	anti-parallel
Strand 4	A	1958	1959	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1528	1536	first strand
Strand 2	A	1980	1987	anti-parallel
Strand 3	A	1969	1975	anti-parallel
Strand 4	A	1963	1966	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1553	1554	first strand
Strand 2	A	1561	1564	anti-parallel
Strand 3	A	1574	1578	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1584	1586	first strand
Strand 2	A	1593	1598	anti-parallel
Strand 3	A	1589	1590	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1584	1586	first strand
Strand 2	A	1593	1598	anti-parallel
Strand 3	A	1602	1606	anti-parallel
Strand 4	A	1620	1622	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1633	1634	first strand
Strand 2	A	1641	1642	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1645	1646	first strand
Strand 2	A	1652	1653	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1704	1709	first strand
Strand 2	A	1712	1717	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1763	1764	first strand
Strand 2	A	1771	1773	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1786	1787	first strand
Strand 2	A	1942	1947	anti-parallel
Strand 3	A	1928	1932	anti-parallel
Strand 4	A	1918	1922	anti-parallel
Strand 5	A	1913	1915	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FAC

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FAC