Analysis of interatomic Contacts of Structural Units in PDB entry:
8FAJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FAJ entry

There are 2 chains in PDB entry 8FAJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 22PRO 265
B
 GLU 24PRO 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8FAJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 37Right-handed alpha
Helix 2
AA2
A
58 63Right-handed alpha
Helix 3
AA3
A
68 71Right-handed 310
Helix 4
AA4
A
72 83Right-handed alpha
Helix 5
AA5
A
102 106Right-handed 310
Helix 6
AA6
A
110 117Right-handed alpha
Helix 7
AA7
A
119 131Right-handed alpha
Helix 8
AA8
A
131 143Right-handed alpha
Helix 9
AA9
A
155 160Right-handed alpha
Helix 10
AB1
A
166 178Right-handed alpha
Helix 11
AB2
A
184 195Right-handed alpha
Helix 12
AB3
A
243 247Right-handed 310
Helix 13
AB4
A
248 261Right-handed alpha
Helix 14
AB5
B
31 38Right-handed alpha
Helix 15
AB6
B
58 63Right-handed alpha
Helix 16
AB7
B
68 71Right-handed 310
Helix 17
AB8
B
72 83Right-handed alpha
Helix 18
AB9
B
102 106Right-handed 310
Helix 19
AC1
B
110 117Right-handed alpha
Helix 20
AC2
B
119 131Right-handed alpha
Helix 21
AC3
B
131 143Right-handed alpha
Helix 22
AC4
B
155 160Right-handed alpha
Helix 23
AC5
B
166 178Right-handed alpha
Helix 24
AC6
B
184 195Right-handed alpha
Helix 25
AC7
B
243 247Right-handed 310
Helix 26
AC8
B
248 261Right-handed alpha
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There are 4 sheets in PDB entry 8FAJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
53 56parallel
Strand 3
A
42 48anti-parallel
Strand 4
A
232 240anti-parallel
Strand 5
A
219 227anti-parallel
Strand 6
A
204 212anti-parallel
Strand 7
A
196 199anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
164 165anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 27first strand
Strand 2
B
53 56parallel
Strand 3
B
42 48anti-parallel
Strand 4
B
232 240anti-parallel
Strand 5
B
219 227anti-parallel
Strand 6
B
204 212anti-parallel
Strand 7
B
196 199anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 66first strand
Strand 2
B
164 165anti-parallel
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