Analysis of interatomic Contacts of Structural Units in PDB entry:
8FBG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FBG entry

There are 2 chains in PDB entry 8FBG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1764GLY 1980
B
 LYS 1763GLY 1980
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8FBG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1786 1790Right-handed 310
Helix 2
AA2
A
1809 1814Right-handed alpha
Helix 3
AA3
A
1825 1829Right-handed 310
Helix 4
AA4
A
1832 1837Right-handed alpha
Helix 5
AA5
A
1875 1889Right-handed alpha
Helix 6
AA6
A
1912 1917Right-handed 310
Helix 7
AA7
B
1809 1814Right-handed alpha
Helix 8
AA8
B
1825 1829Right-handed 310
Helix 9
AA9
B
1832 1837Right-handed alpha
Helix 10
AB1
B
1875 1889Right-handed alpha
Helix 11
AB2
B
1913 1917Right-handed 310
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There are 10 sheets in PDB entry 8FBG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1769 1770first strand
Strand 2
A
1910 1911parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1775 1776first strand
Strand 2
A
1872 1874parallel
Strand 3
A
1904 1906anti-parallel
Strand 4
A
1896 1898anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1842 1846first strand
Strand 2
A
1852 1856anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1865 1868first strand
Strand 2
A
1936 1942anti-parallel
Strand 3
A
1925 1931anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1918 1919first strand
Strand 2
A
1953 1954parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1769 1770first strand
Strand 2
B
1903 1911parallel
Strand 3
B
1871 1874anti-parallel
Strand 4
B
1775 1776parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1769 1770first strand
Strand 2
B
1903 1911parallel
Strand 3
B
1896 1900anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1842 1846first strand
Strand 2
B
1852 1856anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1865 1868first strand
Strand 2
B
1935 1942anti-parallel
Strand 3
B
1925 1932anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1918 1919first strand
Strand 2
B
1953 1954parallel
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