Analysis of interatomic Contacts of Structural Units in PDB entry:
8FC9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FC9 entry

There are 2 chains in PDB entry 8FC9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 150TRP 788
E
MET 1VAL 170
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are164 helices in PDB entry 8FC9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
150 161Right-handed alpha
Helix 2
AA2
A
163 167Right-handed 310
Helix 3
AA3
A
168 177Right-handed alpha
Helix 4
AA4
A
193 201Right-handed alpha
Helix 5
AA5
A
208 221Right-handed alpha
Helix 6
AA6
A
222 229Right-handed alpha
Helix 7
AA7
A
240 248Right-handed alpha
Helix 8
AA8
A
250 260Right-handed alpha
Helix 9
AA9
A
270 274Right-handed 310
Helix 10
AB1
A
275 279Right-handed 310
Helix 11
AB2
A
287 295Right-handed alpha
Helix 12
AB3
A
297 307Right-handed alpha
Helix 13
AB4
A
323 332Right-handed alpha
Helix 14
AB5
A
335 357Right-handed alpha
Helix 15
AB6
A
361 365Right-handed 310
Helix 16
AB7
A
372 381Right-handed alpha
Helix 17
AB8
A
382 391Right-handed alpha
Helix 18
AB9
A
399 403Right-handed 310
Helix 19
AC1
A
432 440Right-handed alpha
Helix 20
AC2
A
445 450Right-handed alpha
Helix 21
AC3
A
452 466Right-handed alpha
Helix 22
AC4
A
466 487Right-handed alpha
Helix 23
AC5
A
507 532Right-handed alpha
Helix 24
AC6
A
550 570Right-handed alpha
Helix 25
AC7
A
573 596Right-handed alpha
Helix 26
AC8
A
599 612Right-handed alpha
Helix 27
AC9
A
612 637Right-handed alpha
Helix 28
AD1
A
664 679Right-handed alpha
Helix 29
AD2
A
683 688Right-handed alpha
Helix 30
AD3
A
691 720Right-handed alpha
Helix 31
AD4
A
721 748Right-handed alpha
Helix 32
AD5
A
749 756Right-handed alpha
Helix 33
AD6
E
17 28Right-handed alpha
Helix 34
AD7
E
65 70Right-handed alpha
Helix 35
AD8
E
71 74Right-handed 310
Helix 36
AD9
E
89 98Right-handed alpha
Helix 37
AE1
E
98 107Right-handed alpha
Helix 38
AE2
E
119 123Right-handed 310
Helix 39
AE3
E
124 134Right-handed alpha
Helix 40
AE4
E
140 151Right-handed alpha
Helix 41
AE5
E
166 180Right-handed alpha
Helix 42
AE6
F
17 28Right-handed alpha
Helix 43
AE7
F
65 70Right-handed alpha
Helix 44
AE8
F
71 74Right-handed 310
Helix 45
AE9
F
89 98Right-handed alpha
Helix 46
AF1
F
98 107Right-handed alpha
Helix 47
AF2
F
119 123Right-handed 310
Helix 48
AF3
F
124 134Right-handed alpha
Helix 49
AF4
F
140 151Right-handed alpha
Helix 50
AF5
F
166 180Right-handed alpha
Helix 51
AF6
G
17 28Right-handed alpha
Helix 52
AF7
G
65 70Right-handed alpha
Helix 53
AF8
G
71 74Right-handed 310
Helix 54
AF9
G
89 98Right-handed alpha
Helix 55
AG1
G
98 107Right-handed alpha
Helix 56
AG2
G
119 123Right-handed 310
Helix 57
AG3
G
124 134Right-handed alpha
Helix 58
AG4
G
140 151Right-handed alpha
Helix 59
AG5
G
166 180Right-handed alpha
Helix 60
AG6
H
17 28Right-handed alpha
Helix 61
AG7
H
65 70Right-handed alpha
Helix 62
AG8
H
71 74Right-handed 310
Helix 63
AG9
H
89 98Right-handed alpha
Helix 64
AH1
H
98 107Right-handed alpha
Helix 65
AH2
H
119 123Right-handed 310
Helix 66
AH3
H
124 134Right-handed alpha
Helix 67
AH4
H
140 151Right-handed alpha
Helix 68
AH5
H
166 180Right-handed alpha
Helix 69
AH6
B
151 161Right-handed alpha
Helix 70
AH7
B
163 167Right-handed 310
Helix 71
AH8
B
168 177Right-handed alpha
Helix 72
AH9
B
193 201Right-handed alpha
Helix 73
AI1
B
208 221Right-handed alpha
Helix 74
AI2
B
222 229Right-handed alpha
Helix 75
AI3
B
240 248Right-handed alpha
Helix 76
AI4
B
250 260Right-handed alpha
Helix 77
AI5
B
270 274Right-handed 310
Helix 78
AI6
B
275 279Right-handed 310
Helix 79
AI7
B
287 295Right-handed alpha
Helix 80
AI8
B
297 307Right-handed alpha
Helix 81
AI9
B
323 332Right-handed alpha
Helix 82
AJ1
B
335 357Right-handed alpha
Helix 83
AJ2
B
361 365Right-handed 310
Helix 84
AJ3
B
372 381Right-handed alpha
Helix 85
AJ4
B
382 391Right-handed alpha
Helix 86
AJ5
B
399 403Right-handed 310
Helix 87
AJ6
B
432 440Right-handed alpha
Helix 88
AJ7
B
445 450Right-handed alpha
Helix 89
AJ8
B
452 466Right-handed alpha
Helix 90
AJ9
B
466 487Right-handed alpha
Helix 91
AK1
B
507 532Right-handed alpha
Helix 92
AK2
B
550 570Right-handed alpha
Helix 93
AK3
B
573 596Right-handed alpha
Helix 94
AK4
B
599 612Right-handed alpha
Helix 95
AK5
B
612 637Right-handed alpha
Helix 96
AK6
B
664 679Right-handed alpha
Helix 97
AK7
B
683 688Right-handed alpha
Helix 98
AK8
B
691 720Right-handed alpha
Helix 99
AK9
B
721 748Right-handed alpha
Helix 100
AL1
B
749 756Right-handed alpha
Helix 101
AL2
C
151 161Right-handed alpha
Helix 102
AL3
C
163 167Right-handed 310
Helix 103
AL4
C
168 177Right-handed alpha
Helix 104
AL5
C
193 201Right-handed alpha
Helix 105
AL6
C
208 221Right-handed alpha
Helix 106
AL7
C
222 229Right-handed alpha
Helix 107
AL8
C
240 248Right-handed alpha
Helix 108
AL9
C
250 260Right-handed alpha
Helix 109
AM1
C
270 274Right-handed 310
Helix 110
AM2
C
275 279Right-handed 310
Helix 111
AM3
C
287 295Right-handed alpha
Helix 112
AM4
C
297 307Right-handed alpha
Helix 113
AM5
C
323 332Right-handed alpha
Helix 114
AM6
C
335 357Right-handed alpha
Helix 115
AM7
C
361 365Right-handed 310
Helix 116
AM8
C
372 381Right-handed alpha
Helix 117
AM9
C
382 391Right-handed alpha
Helix 118
AN1
C
399 403Right-handed 310
Helix 119
AN2
C
432 440Right-handed alpha
Helix 120
AN3
C
445 450Right-handed alpha
Helix 121
AN4
C
452 466Right-handed alpha
Helix 122
AN5
C
466 487Right-handed alpha
Helix 123
AN6
C
507 532Right-handed alpha
Helix 124
AN7
C
550 570Right-handed alpha
Helix 125
AN8
C
573 596Right-handed alpha
Helix 126
AN9
C
599 612Right-handed alpha
Helix 127
AO1
C
612 637Right-handed alpha
Helix 128
AO2
C
664 679Right-handed alpha
Helix 129
AO3
C
683 688Right-handed alpha
Helix 130
AO4
C
691 720Right-handed alpha
Helix 131
AO5
C
721 748Right-handed alpha
Helix 132
AO6
C
749 756Right-handed alpha
Helix 133
AO7
D
151 161Right-handed alpha
Helix 134
AO8
D
163 167Right-handed 310
Helix 135
AO9
D
168 177Right-handed alpha
Helix 136
AP1
D
193 201Right-handed alpha
Helix 137
AP2
D
208 221Right-handed alpha
Helix 138
AP3
D
222 229Right-handed alpha
Helix 139
AP4
D
240 248Right-handed alpha
Helix 140
AP5
D
250 260Right-handed alpha
Helix 141
AP6
D
270 274Right-handed 310
Helix 142
AP7
D
275 279Right-handed 310
Helix 143
AP8
D
287 295Right-handed alpha
Helix 144
AP9
D
297 307Right-handed alpha
Helix 145
AQ1
D
323 332Right-handed alpha
Helix 146
AQ2
D
335 357Right-handed alpha
Helix 147
AQ3
D
361 365Right-handed 310
Helix 148
AQ4
D
372 381Right-handed alpha
Helix 149
AQ5
D
382 391Right-handed alpha
Helix 150
AQ6
D
399 403Right-handed 310
Helix 151
AQ7
D
432 440Right-handed alpha
Helix 152
AQ8
D
445 450Right-handed alpha
Helix 153
AQ9
D
452 466Right-handed alpha
Helix 154
AR1
D
466 487Right-handed alpha
Helix 155
AR2
D
507 532Right-handed alpha
Helix 156
AR3
D
550 570Right-handed alpha
Helix 157
AR4
D
573 596Right-handed alpha
Helix 158
AR5
D
599 612Right-handed alpha
Helix 159
AR6
D
612 637Right-handed alpha
Helix 160
AR7
D
664 679Right-handed alpha
Helix 161
AR8
D
683 688Right-handed alpha
Helix 162
AR9
D
691 720Right-handed alpha
Helix 163
AS1
D
721 748Right-handed alpha
Helix 164
AS2
D
749 756Right-handed alpha
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There are 12 sheets in PDB entry 8FC9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
407 410first strand
Strand 2
A
414 417anti-parallel
Strand 3
A
780 783anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
760 765first strand
Strand 2
A
773 777anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
42 47first strand
Strand 2
E
52 59anti-parallel
Strand 3
E
4 12parallel
Strand 4
E
79 85parallel
Strand 5
E
112 117parallel
Strand 6
E
155 159parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
42 47first strand
Strand 2
F
52 59anti-parallel
Strand 3
F
4 12parallel
Strand 4
F
79 85parallel
Strand 5
F
112 117parallel
Strand 6
F
155 159parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
42 47first strand
Strand 2
G
52 59anti-parallel
Strand 3
G
4 12parallel
Strand 4
G
79 85parallel
Strand 5
G
112 117parallel
Strand 6
G
155 159parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
42 47first strand
Strand 2
H
52 59anti-parallel
Strand 3
H
4 12parallel
Strand 4
H
79 85parallel
Strand 5
H
112 117parallel
Strand 6
H
155 159parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
407 410first strand
Strand 2
B
414 417anti-parallel
Strand 3
B
780 783anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
760 765first strand
Strand 2
B
773 777anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
407 410first strand
Strand 2
C
414 417anti-parallel
Strand 3
C
780 783anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
760 765first strand
Strand 2
C
773 777anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
407 410first strand
Strand 2
D
414 417anti-parallel
Strand 3
D
780 783anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
760 765first strand
Strand 2
D
773 777anti-parallel
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