Analysis of interatomic Contacts of Structural Units in PDB entry:
8FCX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FCX entry

There are 5 chains in PDB entry 8FCX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
R	SER 4	GLY 346
S	SER 4	GLY 346
T	SER 4	GLY 346
U	SER 4	GLY 346
V	SER 4	GLY 346

There are 82 helices in PDB entry 8FCX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	R	8	13	Right-handed 310
Helix 2	AA2	R	15	26	Right-handed alpha
Helix 3	AA3	R	30	46	Right-handed alpha
Helix 4	AA4	R	62	85	Right-handed alpha
Helix 5	AA5	R	105	118	Right-handed alpha
Helix 6	AA6	R	148	164	Right-handed alpha
Helix 7	AA7	R	172	178	Right-handed 310
Helix 8	AA8	R	183	200	Right-handed alpha
Helix 9	AA9	R	208	215	Right-handed 310
Helix 10	AB1	R	218	224	Right-handed alpha
Helix 11	AB2	R	237	254	Right-handed alpha
Helix 12	AB3	R	266	275	Right-handed alpha
Helix 13	AB4	R	277	296	Right-handed alpha
Helix 14	AB5	R	301	308	Right-handed alpha
Helix 15	AB6	R	311	329	Right-handed alpha
Helix 16	AB7	R	333	343	Right-handed alpha
Helix 17	AB8	S	8	14	Right-handed 310
Helix 18	AB9	S	15	26	Right-handed alpha
Helix 19	AC1	S	30	46	Right-handed alpha
Helix 20	AC2	S	62	83	Right-handed alpha
Helix 21	AC3	S	105	118	Right-handed alpha
Helix 22	AC4	S	148	164	Right-handed alpha
Helix 23	AC5	S	172	178	Right-handed 310
Helix 24	AC6	S	183	200	Right-handed alpha
Helix 25	AC7	S	208	215	Right-handed 310
Helix 26	AC8	S	218	224	Right-handed alpha
Helix 27	AC9	S	237	254	Right-handed alpha
Helix 28	AD1	S	266	275	Right-handed alpha
Helix 29	AD2	S	277	295	Right-handed alpha
Helix 30	AD3	S	301	309	Right-handed alpha
Helix 31	AD4	S	311	329	Right-handed alpha
Helix 32	AD5	S	332	343	Right-handed alpha
Helix 33	AD6	T	8	13	Right-handed 310
Helix 34	AD7	T	15	26	Right-handed alpha
Helix 35	AD8	T	30	46	Right-handed alpha
Helix 36	AD9	T	62	85	Right-handed alpha
Helix 37	AE1	T	105	118	Right-handed alpha
Helix 38	AE2	T	148	164	Right-handed alpha
Helix 39	AE3	T	172	178	Right-handed 310
Helix 40	AE4	T	181	200	Right-handed alpha
Helix 41	AE5	T	208	215	Right-handed 310
Helix 42	AE6	T	218	224	Right-handed alpha
Helix 43	AE7	T	237	254	Right-handed alpha
Helix 44	AE8	T	266	275	Right-handed alpha
Helix 45	AE9	T	277	296	Right-handed alpha
Helix 46	AF1	T	301	308	Right-handed alpha
Helix 47	AF2	T	311	329	Right-handed alpha
Helix 48	AF3	T	332	343	Right-handed alpha
Helix 49	AF4	U	8	13	Right-handed 310
Helix 50	AF5	U	15	26	Right-handed alpha
Helix 51	AF6	U	30	46	Right-handed alpha
Helix 52	AF7	U	62	84	Right-handed alpha
Helix 53	AF8	U	105	118	Right-handed alpha
Helix 54	AF9	U	148	164	Right-handed alpha
Helix 55	AG1	U	172	178	Right-handed 310
Helix 56	AG2	U	183	200	Right-handed alpha
Helix 57	AG3	U	208	215	Right-handed 310
Helix 58	AG4	U	218	224	Right-handed alpha
Helix 59	AG5	U	237	254	Right-handed alpha
Helix 60	AG6	U	263	265	Right-handed 310
Helix 61	AG7	U	266	275	Right-handed alpha
Helix 62	AG8	U	277	296	Right-handed alpha
Helix 63	AG9	U	301	308	Right-handed alpha
Helix 64	AH1	U	311	329	Right-handed alpha
Helix 65	AH2	U	332	344	Right-handed alpha
Helix 66	AH3	V	8	13	Right-handed 310
Helix 67	AH4	V	15	26	Right-handed alpha
Helix 68	AH5	V	30	46	Right-handed alpha
Helix 69	AH6	V	62	78	Right-handed alpha
Helix 70	AH7	V	78	85	Right-handed alpha
Helix 71	AH8	V	105	118	Right-handed alpha
Helix 72	AH9	V	148	164	Right-handed alpha
Helix 73	AI1	V	173	178	Right-handed 310
Helix 74	AI2	V	183	200	Right-handed alpha
Helix 75	AI3	V	208	215	Right-handed 310
Helix 76	AI4	V	217	224	Right-handed alpha
Helix 77	AI5	V	237	254	Right-handed alpha
Helix 78	AI6	V	266	275	Right-handed alpha
Helix 79	AI7	V	277	295	Right-handed alpha
Helix 80	AI8	V	301	308	Right-handed alpha
Helix 81	AI9	V	311	329	Right-handed alpha
Helix 82	AJ1	V	332	344	Right-handed alpha

There are 10 sheets in PDB entry 8FCX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	91	95	first strand
Strand 2	R	167	171	parallel
Strand 3	R	202	207	parallel
Strand 4	R	52	57	parallel
Strand 5	R	225	230	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	133	134	first strand
Strand 2	R	142	143	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	91	95	first strand
Strand 2	S	167	171	parallel
Strand 3	S	202	207	parallel
Strand 4	S	52	57	parallel
Strand 5	S	225	230	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	133	134	first strand
Strand 2	S	142	143	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	91	95	first strand
Strand 2	T	167	171	parallel
Strand 3	T	202	206	parallel
Strand 4	T	52	57	parallel
Strand 5	T	225	230	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	133	134	first strand
Strand 2	T	142	143	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	91	95	first strand
Strand 2	U	167	171	parallel
Strand 3	U	203	206	parallel
Strand 4	U	52	57	parallel
Strand 5	U	225	230	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	133	134	first strand
Strand 2	U	142	143	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	92	95	first strand
Strand 2	V	167	171	parallel
Strand 3	V	202	207	parallel
Strand 4	V	52	57	parallel
Strand 5	V	225	230	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	133	134	first strand
Strand 2	V	142	143	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FCX

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FCX