Analysis of interatomic Contacts of Structural Units in PDB entry:
8FE6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FE6 entry

There are 3 chains in PDB entry 8FE6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 312	ILE 1027
B	GLN 2	LEU 11
C	SER 312	ASN 888

There are158 helices in PDB entry 8FE6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	313	330	Right-handed alpha
Helix 2	AA2	A	332	347	Right-handed alpha
Helix 3	AA3	A	350	365	Right-handed alpha
Helix 4	AA4	A	366	381	Right-handed alpha
Helix 5	AA5	A	384	398	Right-handed alpha
Helix 6	AA6	A	400	415	Right-handed alpha
Helix 7	AA7	A	418	432	Right-handed alpha
Helix 8	AA8	A	434	449	Right-handed alpha
Helix 9	AA9	A	452	466	Right-handed alpha
Helix 10	AB1	A	471	489	Right-handed alpha
Helix 11	AB2	A	499	503	Right-handed 310
Helix 12	AB3	A	506	526	Right-handed alpha
Helix 13	AB4	A	527	529	Right-handed 310
Helix 14	AB5	A	558	565	Right-handed alpha
Helix 15	AB6	A	567	571	Right-handed 310
Helix 16	AB7	A	589	599	Right-handed alpha
Helix 17	AB8	A	606	608	Right-handed 310
Helix 18	AB9	A	610	621	Right-handed alpha
Helix 19	AC1	A	638	643	Right-handed alpha
Helix 20	AC2	A	697	702	Right-handed alpha
Helix 21	AC3	A	703	707	Right-handed 310
Helix 22	AC4	A	730	738	Right-handed alpha
Helix 23	AC5	A	770	783	Right-handed alpha
Helix 24	AC6	A	799	804	Right-handed alpha
Helix 25	AC7	A	804	809	Right-handed alpha
Helix 26	AC8	A	823	825	Right-handed 310
Helix 27	AC9	A	839	843	Right-handed 310
Helix 28	AD1	A	844	858	Right-handed alpha
Helix 29	AD2	A	871	883	Right-handed alpha
Helix 30	AD3	A	886	888	Right-handed 310
Helix 31	AD4	A	897	905	Right-handed alpha
Helix 32	AD5	A	906	908	Right-handed 310
Helix 33	AD6	A	920	929	Right-handed alpha
Helix 34	AD7	A	940	943	Right-handed 310
Helix 35	AD8	A	944	954	Right-handed alpha
Helix 36	AD9	A	955	959	Right-handed 310
Helix 37	AE1	A	962	976	Right-handed alpha
Helix 38	AE2	A	976	994	Right-handed alpha
Helix 39	AE3	A	995	997	Right-handed 310
Helix 40	AE4	A	998	1019	Right-handed alpha
Helix 41	AE5	C	313	331	Right-handed alpha
Helix 42	AE6	C	332	347	Right-handed alpha
Helix 43	AE7	C	350	364	Right-handed alpha
Helix 44	AE8	C	366	381	Right-handed alpha
Helix 45	AE9	C	384	398	Right-handed alpha
Helix 46	AF1	C	400	415	Right-handed alpha
Helix 47	AF2	C	418	432	Right-handed alpha
Helix 48	AF3	C	434	449	Right-handed alpha
Helix 49	AF4	C	452	466	Right-handed alpha
Helix 50	AF5	C	471	489	Right-handed alpha
Helix 51	AF6	C	496	501	Right-handed alpha
Helix 52	AF7	C	506	527	Right-handed alpha
Helix 53	AF8	C	558	565	Right-handed alpha
Helix 54	AF9	C	566	571	Right-handed alpha
Helix 55	AG1	C	589	599	Right-handed alpha
Helix 56	AG2	C	606	608	Right-handed 310
Helix 57	AG3	C	610	621	Right-handed alpha
Helix 58	AG4	C	638	643	Right-handed alpha
Helix 59	AG5	C	675	682	Right-handed 310
Helix 60	AG6	C	697	702	Right-handed alpha
Helix 61	AG7	C	703	706	Right-handed 310
Helix 62	AG8	C	730	738	Right-handed alpha
Helix 63	AG9	C	770	782	Right-handed alpha
Helix 64	AH1	C	799	804	Right-handed alpha
Helix 65	AH2	C	804	809	Right-handed alpha
Helix 66	AH3	C	823	825	Right-handed 310
Helix 67	AH4	C	839	843	Right-handed 310
Helix 68	AH5	C	844	858	Right-handed alpha
Helix 69	AH6	C	869	871	Right-handed 310
Helix 70	AH7	C	872	883	Right-handed alpha
Helix 71	AH8	C	897	905	Right-handed alpha
Helix 72	AH9	C	906	908	Right-handed 310
Helix 73	AI1	C	920	929	Right-handed alpha
Helix 74	AI2	C	940	943	Right-handed 310
Helix 75	AI3	C	944	954	Right-handed alpha
Helix 76	AI4	C	955	959	Right-handed 310
Helix 77	AI5	C	962	976	Right-handed alpha
Helix 78	AI6	C	976	994	Right-handed alpha
Helix 79	AI7	C	995	997	Right-handed 310
Helix 80	AI8	C	998	1019	Right-handed alpha
Helix 81	AI9	E	313	329	Right-handed alpha
Helix 82	AJ1	E	332	347	Right-handed alpha
Helix 83	AJ2	E	350	364	Right-handed alpha
Helix 84	AJ3	E	366	381	Right-handed alpha
Helix 85	AJ4	E	384	398	Right-handed alpha
Helix 86	AJ5	E	400	415	Right-handed alpha
Helix 87	AJ6	E	418	432	Right-handed alpha
Helix 88	AJ7	E	434	449	Right-handed alpha
Helix 89	AJ8	E	452	466	Right-handed alpha
Helix 90	AJ9	E	471	489	Right-handed alpha
Helix 91	AK1	E	499	503	Right-handed 310
Helix 92	AK2	E	506	527	Right-handed alpha
Helix 93	AK3	E	560	565	Right-handed alpha
Helix 94	AK4	E	566	571	Right-handed alpha
Helix 95	AK5	E	589	599	Right-handed alpha
Helix 96	AK6	E	606	608	Right-handed 310
Helix 97	AK7	E	610	621	Right-handed alpha
Helix 98	AK8	E	638	643	Right-handed alpha
Helix 99	AK9	E	675	679	Right-handed 310
Helix 100	AL1	E	697	702	Right-handed alpha
Helix 101	AL2	E	703	706	Right-handed 310
Helix 102	AL3	E	730	738	Right-handed alpha
Helix 103	AL4	E	770	782	Right-handed alpha
Helix 104	AL5	E	799	803	Right-handed 310
Helix 105	AL6	E	804	809	Right-handed alpha
Helix 106	AL7	E	823	825	Right-handed 310
Helix 107	AL8	E	839	843	Right-handed 310
Helix 108	AL9	E	844	858	Right-handed alpha
Helix 109	AM1	E	871	883	Right-handed alpha
Helix 110	AM2	E	886	888	Right-handed 310
Helix 111	AM3	E	897	905	Right-handed alpha
Helix 112	AM4	E	906	908	Right-handed 310
Helix 113	AM5	E	920	929	Right-handed alpha
Helix 114	AM6	E	944	954	Right-handed alpha
Helix 115	AM7	E	955	959	Right-handed 310
Helix 116	AM8	E	962	976	Right-handed alpha
Helix 117	AM9	E	976	994	Right-handed alpha
Helix 118	AN1	E	998	1019	Right-handed alpha
Helix 119	AN2	G	313	331	Right-handed alpha
Helix 120	AN3	G	332	347	Right-handed alpha
Helix 121	AN4	G	350	364	Right-handed alpha
Helix 122	AN5	G	366	381	Right-handed alpha
Helix 123	AN6	G	384	398	Right-handed alpha
Helix 124	AN7	G	400	415	Right-handed alpha
Helix 125	AN8	G	418	432	Right-handed alpha
Helix 126	AN9	G	434	449	Right-handed alpha
Helix 127	AO1	G	452	466	Right-handed alpha
Helix 128	AO2	G	471	489	Right-handed alpha
Helix 129	AO3	G	496	501	Right-handed alpha
Helix 130	AO4	G	506	527	Right-handed alpha
Helix 131	AO5	G	560	565	Right-handed alpha
Helix 132	AO6	G	567	571	Right-handed 310
Helix 133	AO7	G	589	599	Right-handed alpha
Helix 134	AO8	G	606	608	Right-handed 310
Helix 135	AO9	G	610	621	Right-handed alpha
Helix 136	AP1	G	638	643	Right-handed alpha
Helix 137	AP2	G	675	682	Right-handed 310
Helix 138	AP3	G	697	702	Right-handed alpha
Helix 139	AP4	G	703	706	Right-handed 310
Helix 140	AP5	G	730	738	Right-handed alpha
Helix 141	AP6	G	770	783	Right-handed alpha
Helix 142	AP7	G	799	804	Right-handed alpha
Helix 143	AP8	G	804	809	Right-handed alpha
Helix 144	AP9	G	823	825	Right-handed 310
Helix 145	AQ1	G	839	843	Right-handed 310
Helix 146	AQ2	G	844	858	Right-handed alpha
Helix 147	AQ3	G	871	883	Right-handed alpha
Helix 148	AQ4	G	886	888	Right-handed 310
Helix 149	AQ5	G	897	904	Right-handed alpha
Helix 150	AQ6	G	905	908	Right-handed 310
Helix 151	AQ7	G	920	929	Right-handed alpha
Helix 152	AQ8	G	940	943	Right-handed 310
Helix 153	AQ9	G	944	954	Right-handed alpha
Helix 154	AR1	G	955	959	Right-handed 310
Helix 155	AR2	G	962	976	Right-handed alpha
Helix 156	AR3	G	976	994	Right-handed alpha
Helix 157	AR4	G	995	997	Right-handed 310
Helix 158	AR5	G	998	1019	Right-handed alpha

There are 13 sheets in PDB entry 8FE6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	601	604	first strand
Strand 2	A	576	582	parallel
Strand 3	A	546	552	parallel
Strand 4	A	625	628	parallel
Strand 5	A	648	651	parallel
Strand 6	A	666	670	parallel
Strand 7	A	685	689	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	742	744	first strand
Strand 2	A	764	767	anti-parallel
Strand 3	A	709	711	parallel
Strand 4	A	724	728	anti-parallel
Strand 5	A	817	821	anti-parallel
Strand 6	A	792	796	parallel
Strand 7	A	786	789	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	890	893	first strand
Strand 2	A	862	866	parallel
Strand 3	A	833	835	parallel
Strand 4	A	910	912	parallel
Strand 5	A	933	934	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	601	604	first strand
Strand 2	C	576	582	parallel
Strand 3	C	546	552	parallel
Strand 4	C	625	628	parallel
Strand 5	C	648	651	parallel
Strand 6	C	666	670	parallel
Strand 7	C	685	689	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	742	744	first strand
Strand 2	C	764	767	anti-parallel
Strand 3	C	709	711	parallel
Strand 4	C	724	727	anti-parallel
Strand 5	C	817	821	anti-parallel
Strand 6	C	792	796	parallel
Strand 7	C	786	789	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	890	893	first strand
Strand 2	C	861	866	parallel
Strand 3	C	832	835	parallel
Strand 4	C	910	912	parallel
Strand 5	C	933	934	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	601	604	first strand
Strand 2	E	576	582	parallel
Strand 3	E	546	552	parallel
Strand 4	E	625	628	parallel
Strand 5	E	648	651	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	666	670	first strand
Strand 2	E	685	689	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	742	744	first strand
Strand 2	E	764	767	anti-parallel
Strand 3	E	709	711	parallel
Strand 4	E	724	727	anti-parallel
Strand 5	E	817	821	anti-parallel
Strand 6	E	792	796	parallel
Strand 7	E	786	789	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	890	893	first strand
Strand 2	E	862	866	parallel
Strand 3	E	833	835	parallel
Strand 4	E	910	912	parallel
Strand 5	E	933	934	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	601	604	first strand
Strand 2	G	576	582	parallel
Strand 3	G	546	552	parallel
Strand 4	G	625	628	parallel
Strand 5	G	648	651	parallel
Strand 6	G	666	670	parallel
Strand 7	G	685	689	parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	742	744	first strand
Strand 2	G	764	767	anti-parallel
Strand 3	G	709	711	parallel
Strand 4	G	724	728	anti-parallel
Strand 5	G	817	821	anti-parallel
Strand 6	G	792	796	parallel
Strand 7	G	786	789	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	890	893	first strand
Strand 2	G	861	866	parallel
Strand 3	G	832	835	parallel
Strand 4	G	910	912	parallel
Strand 5	G	933	934	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FE6

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FE6