Analysis of interatomic Contacts of Structural Units in PDB entry:
8FEB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FEB entry

There is 1 chain in PDB entry 8FEB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 23ASP 523
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 8FEB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
74 79Right-handed alpha
Helix 2
AA2
A
96 101Right-handed 310
Helix 3
AA3
A
122 126Right-handed alpha
Helix 4
AA4
A
186 190Right-handed 310
Helix 5
AA5
A
276 280Right-handed 310
Helix 6
AA6
A
307 310Right-handed 310
Helix 7
AA7
A
317 321Right-handed 310
Helix 8
AA8
A
424 427Right-handed 310
Helix 9
AA9
A
517 523Right-handed alpha
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There are 10 sheets in PDB entry 8FEB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 111first strand
Strand 2
A
81 89anti-parallel
Strand 3
A
130 137anti-parallel
Strand 4
A
49 56anti-parallel
Strand 5
A
33 37anti-parallel
Strand 6
A
165 167parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 121first strand
Strand 2
A
66 72anti-parallel
Strand 3
A
152 158anti-parallel
Strand 4
A
161 162anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 149first strand
Strand 2
A
173 174anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 183first strand
Strand 2
A
510 516anti-parallel
Strand 3
A
499 505anti-parallel
Strand 4
A
479 493anti-parallel
Strand 5
A
461 469anti-parallel
Strand 6
A
446 454anti-parallel
Strand 7
A
437 443anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 183first strand
Strand 2
A
510 516anti-parallel
Strand 3
A
499 505anti-parallel
Strand 4
A
479 493anti-parallel
Strand 5
A
461 469anti-parallel
Strand 6
A
474 475anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 200first strand
Strand 2
A
206 213anti-parallel
Strand 3
A
225 231anti-parallel
Strand 4
A
242 245anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 305first strand
Strand 2
A
287 293anti-parallel
Strand 3
A
267 273anti-parallel
Strand 4
A
254 261anti-parallel
Strand 5
A
331 332parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 328first strand
Strand 2
A
341 348anti-parallel
Strand 3
A
334 335anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 328first strand
Strand 2
A
341 348anti-parallel
Strand 3
A
356 363anti-parallel
Strand 4
A
371 380anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 387first strand
Strand 2
A
393 397anti-parallel
Strand 3
A
409 413anti-parallel
Strand 4
A
421 422anti-parallel
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