Analysis of interatomic Contacts of Structural Units in PDB entry:
8FEH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FEH entry

There is 1 chain in PDB entry 8FEH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ALA 1TYR 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 8FEH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
101 117Right-handed alpha
Helix 2
AA2
D
118 126Right-handed alpha
Helix 3
AA3
D
177 181Right-handed 310
Helix 4
AA4
D
237 252Right-handed alpha
Helix 5
AA5
D
254 262Right-handed alpha
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There are 4 sheets in PDB entry 8FEH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 11first strand
Strand 2
D
17 27anti-parallel
Strand 3
D
32 36anti-parallel
Strand 4
D
48 53anti-parallel
Strand 5
D
62 68anti-parallel
Strand 6
D
89 96anti-parallel
Strand 7
D
226 232anti-parallel
Strand 8
D
198 204anti-parallel
Strand 9
D
184 187anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
71 73first strand
Strand 2
D
84 87anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
142 147first strand
Strand 2
D
153 159anti-parallel
Strand 3
D
171 172anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
208 209first strand
Strand 2
D
220 221anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il