Analysis of interatomic Contacts of Structural Units in PDB entry:
8FEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FEV entry

There are 2 chains in PDB entry 8FEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 11TYR 344
B
 MET 11TYR 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 8FEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 34Right-handed alpha
Helix 2
AA2
A
47 59Right-handed alpha
Helix 3
AA3
A
76 81Right-handed alpha
Helix 4
AA4
A
99 104Right-handed alpha
Helix 5
AA5
A
104 123Right-handed alpha
Helix 6
AA6
A
133 137Right-handed 310
Helix 7
AA7
A
140 145Right-handed alpha
Helix 8
AA8
A
159 167Right-handed alpha
Helix 9
AA9
A
170 191Right-handed alpha
Helix 10
AB1
A
213 220Right-handed alpha
Helix 11
AB2
A
220 225Right-handed alpha
Helix 12
AB3
A
226 241Right-handed alpha
Helix 13
AB4
A
248 261Right-handed alpha
Helix 14
AB5
A
276 288Right-handed alpha
Helix 15
AB6
A
289 292Right-handed 310
Helix 16
AB7
A
294 299Right-handed 310
Helix 17
AB8
A
310 316Right-handed alpha
Helix 18
AB9
A
324 329Right-handed alpha
Helix 19
AC1
A
331 339Right-handed alpha
Helix 20
AC2
B
21 34Right-handed alpha
Helix 21
AC3
B
47 58Right-handed alpha
Helix 22
AC4
B
76 81Right-handed alpha
Helix 23
AC5
B
99 104Right-handed alpha
Helix 24
AC6
B
104 123Right-handed alpha
Helix 25
AC7
B
133 137Right-handed 310
Helix 26
AC8
B
140 146Right-handed alpha
Helix 27
AC9
B
159 167Right-handed alpha
Helix 28
AD1
B
170 191Right-handed alpha
Helix 29
AD2
B
213 220Right-handed alpha
Helix 30
AD3
B
220 225Right-handed alpha
Helix 31
AD4
B
226 241Right-handed alpha
Helix 32
AD5
B
248 261Right-handed alpha
Helix 33
AD6
B
276 288Right-handed alpha
Helix 34
AD7
B
289 292Right-handed 310
Helix 35
AD8
B
294 299Right-handed 310
Helix 36
AD9
B
310 316Right-handed alpha
Helix 37
AE1
B
324 329Right-handed alpha
Helix 38
AE2
B
331 339Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 8FEV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 67first strand
Strand 2
A
37 42parallel
Strand 3
A
13 17parallel
Strand 4
A
85 88parallel
Strand 5
A
127 131parallel
Strand 6
A
195 200parallel
Strand 7
A
266 270parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 152first strand
Strand 2
A
306 308parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 204first strand
Strand 2
A
245 247parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 67first strand
Strand 2
B
37 42parallel
Strand 3
B
13 16parallel
Strand 4
B
85 88parallel
Strand 5
B
127 131parallel
Strand 6
B
195 200parallel
Strand 7
B
266 270parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 152first strand
Strand 2
B
306 308parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 204first strand
Strand 2
B
245 247parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il