Analysis of interatomic Contacts of Structural Units in PDB entry:
8FEZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FEZ entry

There are 3 chains in PDB entry 8FEZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 29	LEU 1145
B	TYR 28	GLN 1143
C	PRO 25	SER 1147

There are 63 helices in PDB entry 8FEZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	303	Right-handed alpha
Helix 2	AA2	A	337	342	Right-handed alpha
Helix 3	AA3	A	366	371	Right-handed alpha
Helix 4	AA4	A	406	411	Right-handed 310
Helix 5	AA5	A	737	742	Right-handed alpha
Helix 6	AA6	A	749	756	Right-handed alpha
Helix 7	AA7	A	758	783	Right-handed alpha
Helix 8	AA8	A	801	805	Right-handed 310
Helix 9	AA9	A	816	824	Right-handed alpha
Helix 10	AB1	A	866	882	Right-handed alpha
Helix 11	AB2	A	898	910	Right-handed alpha
Helix 12	AB3	A	922	936	Right-handed alpha
Helix 13	AB4	A	937	942	Right-handed alpha
Helix 14	AB5	A	945	965	Right-handed alpha
Helix 15	AB6	A	976	984	Right-handed alpha
Helix 16	AB7	A	985	1033	Right-handed alpha
Helix 17	AB8	A	1116	1118	Right-handed 310
Helix 18	AB9	B	72	76	Right-handed 310
Helix 19	AC1	B	294	303	Right-handed alpha
Helix 20	AC2	B	337	343	Right-handed alpha
Helix 21	AC3	B	365	370	Right-handed alpha
Helix 22	AC4	B	383	389	Right-handed 310
Helix 23	AC5	B	405	410	Right-handed 310
Helix 24	AC6	B	416	422	Right-handed alpha
Helix 25	AC7	B	737	742	Right-handed alpha
Helix 26	AC8	B	747	754	Right-handed alpha
Helix 27	AC9	B	758	782	Right-handed alpha
Helix 28	AD1	B	801	805	Right-handed 310
Helix 29	AD2	B	816	825	Right-handed alpha
Helix 30	AD3	B	866	882	Right-handed alpha
Helix 31	AD4	B	897	909	Right-handed alpha
Helix 32	AD5	B	912	919	Right-handed alpha
Helix 33	AD6	B	919	938	Right-handed alpha
Helix 34	AD7	B	941	945	Right-handed 310
Helix 35	AD8	B	946	967	Right-handed alpha
Helix 36	AD9	B	976	984	Right-handed alpha
Helix 37	AE1	B	985	990	Right-handed 310
Helix 38	AE2	B	993	1032	Right-handed alpha
Helix 39	AE3	B	1116	1120	Right-handed 310
Helix 40	AE4	C	294	303	Right-handed alpha
Helix 41	AE5	C	338	343	Right-handed alpha
Helix 42	AE6	C	365	371	Right-handed alpha
Helix 43	AE7	C	383	389	Right-handed 310
Helix 44	AE8	C	416	422	Right-handed alpha
Helix 45	AE9	C	447	451	Right-handed 310
Helix 46	AF1	C	737	743	Right-handed alpha
Helix 47	AF2	C	746	754	Right-handed alpha
Helix 48	AF3	C	755	757	Right-handed 310
Helix 49	AF4	C	758	783	Right-handed alpha
Helix 50	AF5	C	784	786	Right-handed 310
Helix 51	AF6	C	801	805	Right-handed 310
Helix 52	AF7	C	816	825	Right-handed alpha
Helix 53	AF8	C	866	889	Right-handed alpha
Helix 54	AF9	C	897	908	Right-handed alpha
Helix 55	AG1	C	912	919	Right-handed alpha
Helix 56	AG2	C	919	936	Right-handed alpha
Helix 57	AG3	C	942	944	Right-handed 310
Helix 58	AG4	C	945	967	Right-handed alpha
Helix 59	AG5	C	976	984	Right-handed alpha
Helix 60	AG6	C	984	1033	Right-handed alpha
Helix 61	AG7	C	1116	1120	Right-handed 310
Helix 62	AG8	C	1125	1129	Right-handed 310
Helix 63	AG9	C	1140	1145	Right-handed alpha

There are 40 sheets in PDB entry 8FEZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	51	first strand
Strand 2	A	275	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	206	first strand
Strand 2	A	190	193	anti-parallel
Strand 3	A	90	94	anti-parallel
Strand 4	A	266	269	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	129	first strand
Strand 2	A	167	170	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	319	first strand
Strand 2	A	592	599	anti-parallel
Strand 3	A	609	612	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	380	first strand
Strand 2	A	431	434	anti-parallel
Strand 3	A	512	514	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	550	551	first strand
Strand 2	A	588	589	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	575	576	first strand
Strand 2	A	565	566	anti-parallel
Strand 3	B	42	43	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	655	first strand
Strand 2	A	693	696	parallel
Strand 3	A	670	673	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	701	703	first strand
Strand 2	B	787	789	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1078	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	728	first strand
Strand 2	A	1059	1078	anti-parallel
Strand 3	A	1094	1097	anti-parallel
Strand 4	A	1103	1106	anti-parallel
Strand 5	A	1109	1113	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	734	736	first strand
Strand 2	A	858	860	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	787	788	first strand
Strand 2	C	701	702	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1089	1090	first strand
Strand 2	A	1120	1121	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	31	first strand
Strand 2	B	60	64	anti-parallel
Strand 3	B	266	269	anti-parallel
Strand 4	B	89	93	anti-parallel
Strand 5	B	191	196	anti-parallel
Strand 6	B	201	206	anti-parallel
Strand 7	B	224	229	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	240	anti-parallel
Strand 3	B	103	107	anti-parallel
Strand 4	B	116	120	anti-parallel
Strand 5	B	127	132	anti-parallel
Strand 6	B	164	171	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	319	first strand
Strand 2	B	592	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	328	first strand
Strand 2	B	538	543	parallel
Strand 3	B	546	554	anti-parallel
Strand 4	B	584	588	anti-parallel
Strand 5	B	573	577	anti-parallel
Strand 6	B	565	567	anti-parallel
Strand 7	C	42	43	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	391	393	first strand
Strand 2	B	524	525	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	433	434	first strand
Strand 2	B	511	512	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	655	first strand
Strand 2	B	691	696	parallel
Strand 3	B	670	675	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	713	715	first strand
Strand 2	B	1072	1074	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	728	first strand
Strand 2	B	1059	1069	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	734	736	first strand
Strand 2	B	858	860	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	888	889	first strand
Strand 2	B	892	893	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1094	1096	first strand
Strand 2	B	1103	1106	anti-parallel
Strand 3	B	1109	1114	anti-parallel

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There are 7 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	37	first strand
Strand 2	C	222	229	parallel
Strand 3	C	200	207	anti-parallel
Strand 4	C	190	197	anti-parallel
Strand 5	C	89	92	anti-parallel
Strand 6	C	265	269	anti-parallel
Strand 7	C	63	65	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	240	anti-parallel
Strand 3	C	104	107	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	118	122	first strand
Strand 2	C	125	130	anti-parallel
Strand 3	C	168	172	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	325	328	first strand
Strand 2	C	538	543	parallel
Strand 3	C	546	554	anti-parallel
Strand 4	C	584	589	anti-parallel
Strand 5	C	573	577	anti-parallel
Strand 6	C	565	567	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	395	402	anti-parallel
Strand 3	C	508	514	anti-parallel
Strand 4	C	431	437	anti-parallel
Strand 5	C	377	379	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	362	first strand
Strand 2	C	524	525	parallel
Strand 3	C	391	392	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	691	696	parallel
Strand 3	C	670	675	anti-parallel
Strand 4	C	664	667	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	713	715	first strand
Strand 2	C	1072	1074	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	718	728	first strand
Strand 2	C	1059	1069	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	734	736	first strand
Strand 2	C	858	860	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1094	1096	first strand
Strand 2	C	1103	1105	anti-parallel
Strand 3	C	1113	1114	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FEZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FEZ