Analysis of interatomic Contacts of Structural Units in PDB entry:
8FFZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FFZ entry

There are 10 chains in PDB entry 8FFZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 44	LEU 396
B	MET 1	THR 1160
C	GLU 127	ILE 1025
D	LEU 24	VAL 647
E	ARG 155	SER 672
F	MET 1	MET 588
G	MET 1	MET 435
H	ASP 177	LEU 602
I	T 1	T 151
J	A 1	A 151

There are155 helices in PDB entry 8FFZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	62	74	Right-handed alpha
Helix 2	AA2	A	91	102	Right-handed alpha
Helix 3	AA3	A	119	130	Right-handed alpha
Helix 4	AA4	A	147	159	Right-handed alpha
Helix 5	AA5	A	174	186	Right-handed alpha
Helix 6	AA6	A	207	219	Right-handed alpha
Helix 7	AA7	A	233	245	Right-handed alpha
Helix 8	AA8	A	265	274	Right-handed alpha
Helix 9	AA9	A	283	288	Right-handed alpha
Helix 10	AB1	A	332	349	Right-handed alpha
Helix 11	AB2	A	353	362	Right-handed alpha
Helix 12	AB3	A	378	396	Right-handed alpha
Helix 13	AB4	B	8	21	Right-handed alpha
Helix 14	AB5	B	27	36	Right-handed alpha
Helix 15	AB6	B	42	56	Right-handed alpha
Helix 16	AB7	B	71	78	Right-handed alpha
Helix 17	AB8	B	88	98	Right-handed alpha
Helix 18	AB9	B	107	121	Right-handed alpha
Helix 19	AC1	B	127	135	Right-handed alpha
Helix 20	AC2	B	137	146	Right-handed alpha
Helix 21	AC3	B	147	149	Right-handed 310
Helix 22	AC4	B	184	199	Right-handed alpha
Helix 23	AC5	B	206	213	Right-handed alpha
Helix 24	AC6	B	218	235	Right-handed alpha
Helix 25	AC7	B	306	310	Right-handed 310
Helix 26	AC8	B	333	345	Right-handed alpha
Helix 27	AC9	B	346	349	Right-handed 310
Helix 28	AD1	B	352	360	Right-handed alpha
Helix 29	AD2	B	361	363	Right-handed 310
Helix 30	AD3	B	364	373	Right-handed alpha
Helix 31	AD4	B	408	417	Right-handed alpha
Helix 32	AD5	B	437	445	Right-handed alpha
Helix 33	AD6	B	549	565	Right-handed alpha
Helix 34	AD7	B	573	585	Right-handed alpha
Helix 35	AD8	B	591	605	Right-handed alpha
Helix 36	AD9	B	627	643	Right-handed alpha
Helix 37	AE1	B	742	757	Right-handed alpha
Helix 38	AE2	B	761	766	Right-handed alpha
Helix 39	AE3	B	774	810	Right-handed alpha
Helix 40	AE4	B	814	820	Right-handed alpha
Helix 41	AE5	B	822	835	Right-handed alpha
Helix 42	AE6	B	847	855	Right-handed alpha
Helix 43	AE7	B	874	885	Right-handed alpha
Helix 44	AE8	B	897	916	Right-handed alpha
Helix 45	AE9	B	933	947	Right-handed alpha
Helix 46	AF1	B	961	971	Right-handed alpha
Helix 47	AF2	B	972	992	Right-handed alpha
Helix 48	AF3	B	1003	1016	Right-handed alpha
Helix 49	AF4	B	1041	1046	Right-handed 310
Helix 50	AF5	B	1087	1105	Right-handed alpha
Helix 51	AF6	B	1109	1117	Right-handed alpha
Helix 52	AF7	B	1122	1136	Right-handed alpha
Helix 53	AF8	B	1143	1145	Right-handed 310
Helix 54	AF9	C	128	141	Right-handed alpha
Helix 55	AG1	C	143	156	Right-handed alpha
Helix 56	AG2	C	161	175	Right-handed alpha
Helix 57	AG3	C	177	190	Right-handed alpha
Helix 58	AG4	C	195	197	Right-handed 310
Helix 59	AG5	C	198	209	Right-handed alpha
Helix 60	AG6	C	211	226	Right-handed alpha
Helix 61	AG7	C	229	244	Right-handed alpha
Helix 62	AG8	C	245	260	Right-handed alpha
Helix 63	AG9	C	263	277	Right-handed alpha
Helix 64	AH1	C	279	311	Right-handed alpha
Helix 65	AH2	C	333	338	Right-handed alpha
Helix 66	AH3	C	342	350	Right-handed alpha
Helix 67	AH4	C	356	371	Right-handed alpha
Helix 68	AH5	C	373	389	Right-handed alpha
Helix 69	AH6	C	394	399	Right-handed 310
Helix 70	AH7	C	403	412	Right-handed 310
Helix 71	AH8	C	415	419	Right-handed 310
Helix 72	AH9	C	420	426	Right-handed alpha
Helix 73	AI1	C	431	445	Right-handed alpha
Helix 74	AI2	C	447	456	Right-handed alpha
Helix 75	AI3	C	457	460	Right-handed 310
Helix 76	AI4	C	462	465	Right-handed 310
Helix 77	AI5	C	466	480	Right-handed alpha
Helix 78	AI6	C	482	491	Right-handed alpha
Helix 79	AI7	C	492	496	Right-handed 310
Helix 80	AI8	C	501	516	Right-handed alpha
Helix 81	AI9	C	517	532	Right-handed alpha
Helix 82	AJ1	C	535	549	Right-handed alpha
Helix 83	AJ2	C	551	576	Right-handed alpha
Helix 84	AJ3	C	614	639	Right-handed alpha
Helix 85	AJ4	C	646	666	Right-handed alpha
Helix 86	AJ5	C	732	750	Right-handed alpha
Helix 87	AJ6	C	751	765	Right-handed alpha
Helix 88	AJ7	C	765	770	Right-handed alpha
Helix 89	AJ8	C	771	787	Right-handed alpha
Helix 90	AJ9	C	791	806	Right-handed alpha
Helix 91	AK1	C	809	819	Right-handed alpha
Helix 92	AK2	C	822	832	Right-handed alpha
Helix 93	AK3	C	832	852	Right-handed alpha
Helix 94	AK4	C	874	887	Right-handed alpha
Helix 95	AK5	C	890	903	Right-handed alpha
Helix 96	AK6	C	908	924	Right-handed alpha
Helix 97	AK7	C	930	953	Right-handed alpha
Helix 98	AK8	C	954	973	Right-handed alpha
Helix 99	AK9	C	974	988	Right-handed alpha
Helix 100	AL1	C	992	1009	Right-handed alpha
Helix 101	AL2	C	1011	1023	Right-handed alpha
Helix 102	AL3	D	48	59	Right-handed alpha
Helix 103	AL4	D	61	69	Right-handed alpha
Helix 104	AL5	D	124	129	Right-handed alpha
Helix 105	AL6	D	132	139	Right-handed alpha
Helix 106	AL7	D	173	181	Right-handed alpha
Helix 107	AL8	D	187	198	Right-handed alpha
Helix 108	AL9	D	208	212	Right-handed 310
Helix 109	AM1	D	612	616	Right-handed 310
Helix 110	AM2	D	617	629	Right-handed alpha
Helix 111	AM3	D	629	640	Right-handed alpha
Helix 112	AM4	E	159	163	Right-handed 310
Helix 113	AM5	E	165	175	Right-handed alpha
Helix 114	AM6	E	177	192	Right-handed alpha
Helix 115	AM7	E	199	204	Right-handed alpha
Helix 116	AM8	E	215	219	Right-handed 310
Helix 117	AM9	E	222	227	Right-handed alpha
Helix 118	AN1	E	228	232	Right-handed 310
Helix 119	AN2	E	239	247	Right-handed alpha
Helix 120	AN3	E	326	330	Right-handed 310
Helix 121	AN4	E	498	503	Right-handed alpha
Helix 122	AN5	E	582	587	Right-handed alpha
Helix 123	AN6	E	592	597	Right-handed alpha
Helix 124	AN7	E	637	640	Right-handed 310
Helix 125	AN8	F	51	54	Right-handed 310
Helix 126	AN9	F	306	322	Right-handed alpha
Helix 127	AO1	F	360	363	Right-handed 310
Helix 128	AO2	F	385	395	Right-handed alpha
Helix 129	AO3	F	422	433	Right-handed alpha
Helix 130	AO4	F	433	444	Right-handed alpha
Helix 131	AO5	F	451	465	Right-handed alpha
Helix 132	AO6	F	466	469	Right-handed 310
Helix 133	AO7	F	471	486	Right-handed alpha
Helix 134	AO8	F	510	512	Right-handed 310
Helix 135	AO9	F	564	574	Right-handed alpha
Helix 136	AP1	G	14	18	Right-handed 310
Helix 137	AP2	G	37	54	Right-handed alpha
Helix 138	AP3	G	66	81	Right-handed alpha
Helix 139	AP4	G	88	91	Right-handed 310
Helix 140	AP5	G	107	115	Right-handed alpha
Helix 141	AP6	G	135	158	Right-handed alpha
Helix 142	AP7	G	169	182	Right-handed alpha
Helix 143	AP8	G	351	354	Right-handed 310
Helix 144	AP9	H	178	190	Right-handed alpha
Helix 145	AQ1	H	194	212	Right-handed alpha
Helix 146	AQ2	H	219	235	Right-handed alpha
Helix 147	AQ3	H	240	248	Right-handed alpha
Helix 148	AQ4	H	251	265	Right-handed alpha
Helix 149	AQ5	H	267	272	Right-handed alpha
Helix 150	AQ6	H	287	297	Right-handed alpha
Helix 151	AQ7	H	407	413	Right-handed alpha
Helix 152	AQ8	H	454	472	Right-handed alpha
Helix 153	AQ9	H	497	505	Right-handed alpha
Helix 154	AR1	H	545	563	Right-handed alpha
Helix 155	AR2	H	587	593	Right-handed alpha

There are 41 sheets in PDB entry 8FFZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	80	81	first strand
Strand 2	A	88	89	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	109	first strand
Strand 2	A	116	117	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	135	first strand
Strand 2	A	144	145	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	194	195	first strand
Strand 2	A	204	205	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	223	first strand
Strand 2	A	230	232	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	249	251	first strand
Strand 2	D	642	645	anti-parallel
Strand 3	B	994	998	parallel
Strand 4	B	1049	1053	anti-parallel
Strand 5	B	1019	1023	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	366	first strand
Strand 2	A	375	376	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	26	first strand
Strand 2	B	83	87	anti-parallel
Strand 3	B	59	63	anti-parallel
Strand 4	B	66	67	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	126	first strand
Strand 2	B	162	169	anti-parallel
Strand 3	B	152	159	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	205	first strand
Strand 2	B	248	258	anti-parallel
Strand 3	B	238	245	anti-parallel
Strand 4	B	315	317	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	350	351	first strand
Strand 2	B	401	407	anti-parallel
Strand 3	B	391	398	anti-parallel
Strand 4	B	376	378	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	454	457	first strand
Strand 2	B	463	466	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	569	571	first strand
Strand 2	B	619	622	anti-parallel
Strand 3	B	609	612	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	655	656	first strand
Strand 2	G	417	418	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	858	859	first strand
Strand 2	G	430	433	anti-parallel
Strand 3	G	334	337	anti-parallel
Strand 4	G	328	331	anti-parallel
Strand 5	G	316	320	anti-parallel
Strand 6	D	29	30	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	888	892	first strand
Strand 2	G	340	349	anti-parallel
Strand 3	D	35	41	anti-parallel
Strand 4	D	147	160	parallel
Strand 5	D	103	107	anti-parallel
Strand 6	D	81	83	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	888	892	first strand
Strand 2	G	340	349	anti-parallel
Strand 3	G	421	428	anti-parallel
Strand 4	G	291	299	parallel
Strand 5	D	114	122	anti-parallel
Strand 6	D	147	160	anti-parallel
Strand 7	D	103	107	anti-parallel
Strand 8	D	81	83	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	950	953	first strand
Strand 2	B	956	959	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1139	1142	first strand
Strand 2	B	1146	1149	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	726	727	first strand
Strand 2	C	730	731	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1024	1025	first strand
Strand 2	D	44	45	parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	234	238	first strand
Strand 2	E	407	413	anti-parallel
Strand 3	E	353	361	parallel
Strand 4	E	339	347	anti-parallel
Strand 5	E	310	318	anti-parallel
Strand 6	E	291	297	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	261	265	first strand
Strand 2	E	254	258	anti-parallel
Strand 3	E	613	616	parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	271	272	first strand
Strand 2	E	283	285	anti-parallel
Strand 3	E	667	670	anti-parallel
Strand 4	E	656	661	anti-parallel
Strand 5	E	642	647	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	366	371	first strand
Strand 2	E	380	388	anti-parallel
Strand 3	E	393	399	anti-parallel
Strand 4	E	416	418	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	425	432	first strand
Strand 2	E	435	440	anti-parallel
Strand 3	E	444	449	anti-parallel
Strand 4	E	459	461	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	467	473	first strand
Strand 2	E	481	486	anti-parallel
Strand 3	E	490	494	anti-parallel
Strand 4	E	504	508	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	517	520	first strand
Strand 2	E	525	529	anti-parallel
Strand 3	E	534	539	anti-parallel
Strand 4	E	547	551	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	556	560	first strand
Strand 2	E	567	572	anti-parallel
Strand 3	E	576	581	anti-parallel
Strand 4	E	598	604	anti-parallel
Strand 5	E	621	624	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	7	10	first strand
Strand 2	F	365	372	anti-parallel
Strand 3	F	344	353	anti-parallel
Strand 4	F	329	338	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	21	23	first strand
Strand 2	F	29	31	anti-parallel
Strand 3	F	37	42	anti-parallel
Strand 4	F	56	61	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	88	93	first strand
Strand 2	F	100	104	anti-parallel
Strand 3	F	109	113	anti-parallel
Strand 4	F	116	120	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	132	137	first strand
Strand 2	F	143	148	anti-parallel
Strand 3	F	152	159	anti-parallel
Strand 4	F	167	175	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	185	191	first strand
Strand 2	F	194	199	anti-parallel
Strand 3	F	204	208	anti-parallel
Strand 4	F	219	222	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	231	235	first strand
Strand 2	F	238	243	anti-parallel
Strand 3	F	246	251	anti-parallel
Strand 4	F	257	261	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	269	272	first strand
Strand 2	F	280	284	anti-parallel
Strand 3	F	289	293	anti-parallel
Strand 4	F	301	302	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	495	499	first strand
Strand 2	F	504	508	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	518	520	first strand
Strand 2	F	526	528	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	542	544	first strand
Strand 2	F	551	553	anti-parallel

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There are 7 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	119	120	first strand
Strand 2	G	84	86	parallel
Strand 3	G	60	63	parallel
Strand 4	G	163	168	parallel
Strand 5	G	5	10	parallel
Strand 6	G	204	209	anti-parallel
Strand 7	G	236	243	anti-parallel

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There are 10 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	419	421	first strand
Strand 2	H	425	429	anti-parallel
Strand 3	H	438	442	anti-parallel
Strand 4	H	446	452	anti-parallel
Strand 5	H	392	401	anti-parallel
Strand 6	H	479	491	anti-parallel
Strand 7	H	537	543	anti-parallel
Strand 8	H	528	532	anti-parallel
Strand 9	H	519	523	anti-parallel
Strand 10	H	509	510	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FFZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FFZ