Analysis of interatomic Contacts of Structural Units in PDB entry:
8FHG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FHG entry

There are 2 chains in PDB entry 8FHG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
GLN 203TYR 477
D
GLY 2262MET 2272
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 8FHG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
B
205 226Right-handed alpha
Helix 2
AA2
B
229 238Right-handed alpha
Helix 3
AA3
B
251 258Right-handed alpha
Helix 4
AA4
B
259 262Right-handed 310
Helix 5
AA5
B
276 289Right-handed alpha
Helix 6
AA6
B
289 303Right-handed alpha
Helix 7
AA7
B
305 309Right-handed 310
Helix 8
AA8
B
310 333Right-handed alpha
Helix 9
AA9
B
350 356Right-handed alpha
Helix 10
AB1
B
359 363Right-handed 310
Helix 11
AB2
B
364 376Right-handed alpha
Helix 12
AB3
B
380 393Right-handed alpha
Helix 13
AB4
B
402 425Right-handed alpha
Helix 14
AB5
B
430 459Right-handed alpha
Helix 15
AB6
B
466 475Right-handed alpha
Helix 16
AB7
D
2263 2272Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8FHG.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
247 249first strand
Strand 2
B
346 349parallel
Strand 3
B
338 341anti-parallel
Strand 4
B
334 335anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il