Analysis of interatomic Contacts of Structural Units in PDB entry:
8FHH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FHH entry

There are 4 chains in PDB entry 8FHH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TRP 29	ASP 638
B	TRP 29	ASP 638
C	TRP 29	ASP 638
D	TRP 29	ASP 638

There are136 helices in PDB entry 8FHH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	29	46	Right-handed alpha
Helix 2	AA2	A	47	56	Right-handed alpha
Helix 3	AA3	A	57	67	Right-handed alpha
Helix 4	AA4	A	81	89	Right-handed alpha
Helix 5	AA5	A	91	102	Right-handed alpha
Helix 6	AA6	A	103	108	Right-handed 310
Helix 7	AA7	A	112	116	Right-handed 310
Helix 8	AA8	A	119	127	Right-handed alpha
Helix 9	AA9	A	129	140	Right-handed alpha
Helix 10	AB1	A	149	153	Right-handed 310
Helix 11	AB2	A	165	174	Right-handed alpha
Helix 12	AB3	A	175	185	Right-handed alpha
Helix 13	AB4	A	198	205	Right-handed alpha
Helix 14	AB5	A	210	221	Right-handed alpha
Helix 15	AB6	A	231	235	Right-handed 310
Helix 16	AB7	A	242	251	Right-handed alpha
Helix 17	AB8	A	252	262	Right-handed alpha
Helix 18	AB9	A	280	285	Right-handed alpha
Helix 19	AC1	A	291	298	Right-handed alpha
Helix 20	AC2	A	302	307	Right-handed 310
Helix 21	AC3	A	310	324	Right-handed alpha
Helix 22	AC4	A	324	349	Right-handed alpha
Helix 23	AC5	A	372	377	Right-handed alpha
Helix 24	AC6	A	379	411	Right-handed alpha
Helix 25	AC7	A	411	418	Right-handed alpha
Helix 26	AC8	A	422	445	Right-handed alpha
Helix 27	AC9	A	450	464	Right-handed alpha
Helix 28	AD1	A	465	472	Right-handed 310
Helix 29	AD2	A	475	487	Right-handed alpha
Helix 30	AD3	A	488	512	Right-handed alpha
Helix 31	AD4	A	525	538	Right-handed alpha
Helix 32	AD5	A	552	566	Right-handed alpha
Helix 33	AD6	A	569	585	Right-handed alpha
Helix 34	AD7	A	585	608	Right-handed alpha
Helix 35	AD8	B	30	46	Right-handed alpha
Helix 36	AD9	B	47	56	Right-handed alpha
Helix 37	AE1	B	57	67	Right-handed alpha
Helix 38	AE2	B	81	89	Right-handed alpha
Helix 39	AE3	B	91	102	Right-handed alpha
Helix 40	AE4	B	103	108	Right-handed 310
Helix 41	AE5	B	112	116	Right-handed 310
Helix 42	AE6	B	119	127	Right-handed alpha
Helix 43	AE7	B	129	140	Right-handed alpha
Helix 44	AE8	B	149	153	Right-handed 310
Helix 45	AE9	B	165	174	Right-handed alpha
Helix 46	AF1	B	175	185	Right-handed alpha
Helix 47	AF2	B	198	205	Right-handed alpha
Helix 48	AF3	B	210	221	Right-handed alpha
Helix 49	AF4	B	231	235	Right-handed 310
Helix 50	AF5	B	242	251	Right-handed alpha
Helix 51	AF6	B	252	262	Right-handed alpha
Helix 52	AF7	B	280	285	Right-handed alpha
Helix 53	AF8	B	291	298	Right-handed alpha
Helix 54	AF9	B	302	307	Right-handed 310
Helix 55	AG1	B	310	324	Right-handed alpha
Helix 56	AG2	B	324	349	Right-handed alpha
Helix 57	AG3	B	372	377	Right-handed alpha
Helix 58	AG4	B	379	411	Right-handed alpha
Helix 59	AG5	B	411	418	Right-handed alpha
Helix 60	AG6	B	422	445	Right-handed alpha
Helix 61	AG7	B	450	464	Right-handed alpha
Helix 62	AG8	B	465	472	Right-handed 310
Helix 63	AG9	B	475	487	Right-handed alpha
Helix 64	AH1	B	488	512	Right-handed alpha
Helix 65	AH2	B	525	538	Right-handed alpha
Helix 66	AH3	B	552	566	Right-handed alpha
Helix 67	AH4	B	569	585	Right-handed alpha
Helix 68	AH5	B	585	608	Right-handed alpha
Helix 69	AH6	C	30	46	Right-handed alpha
Helix 70	AH7	C	47	56	Right-handed alpha
Helix 71	AH8	C	57	67	Right-handed alpha
Helix 72	AH9	C	81	89	Right-handed alpha
Helix 73	AI1	C	91	102	Right-handed alpha
Helix 74	AI2	C	103	108	Right-handed 310
Helix 75	AI3	C	112	116	Right-handed 310
Helix 76	AI4	C	119	127	Right-handed alpha
Helix 77	AI5	C	129	140	Right-handed alpha
Helix 78	AI6	C	149	153	Right-handed 310
Helix 79	AI7	C	165	174	Right-handed alpha
Helix 80	AI8	C	175	185	Right-handed alpha
Helix 81	AI9	C	198	205	Right-handed alpha
Helix 82	AJ1	C	210	221	Right-handed alpha
Helix 83	AJ2	C	231	235	Right-handed 310
Helix 84	AJ3	C	242	251	Right-handed alpha
Helix 85	AJ4	C	252	262	Right-handed alpha
Helix 86	AJ5	C	280	285	Right-handed alpha
Helix 87	AJ6	C	291	298	Right-handed alpha
Helix 88	AJ7	C	302	307	Right-handed 310
Helix 89	AJ8	C	310	324	Right-handed alpha
Helix 90	AJ9	C	324	349	Right-handed alpha
Helix 91	AK1	C	372	377	Right-handed alpha
Helix 92	AK2	C	379	411	Right-handed alpha
Helix 93	AK3	C	411	418	Right-handed alpha
Helix 94	AK4	C	422	445	Right-handed alpha
Helix 95	AK5	C	450	464	Right-handed alpha
Helix 96	AK6	C	465	472	Right-handed 310
Helix 97	AK7	C	475	487	Right-handed alpha
Helix 98	AK8	C	488	512	Right-handed alpha
Helix 99	AK9	C	525	538	Right-handed alpha
Helix 100	AL1	C	552	566	Right-handed alpha
Helix 101	AL2	C	569	585	Right-handed alpha
Helix 102	AL3	C	585	608	Right-handed alpha
Helix 103	AL4	D	30	46	Right-handed alpha
Helix 104	AL5	D	47	56	Right-handed alpha
Helix 105	AL6	D	57	67	Right-handed alpha
Helix 106	AL7	D	81	89	Right-handed alpha
Helix 107	AL8	D	91	102	Right-handed alpha
Helix 108	AL9	D	103	108	Right-handed 310
Helix 109	AM1	D	112	116	Right-handed 310
Helix 110	AM2	D	119	127	Right-handed alpha
Helix 111	AM3	D	129	140	Right-handed alpha
Helix 112	AM4	D	149	153	Right-handed 310
Helix 113	AM5	D	165	174	Right-handed alpha
Helix 114	AM6	D	175	185	Right-handed alpha
Helix 115	AM7	D	198	205	Right-handed alpha
Helix 116	AM8	D	210	221	Right-handed alpha
Helix 117	AM9	D	231	235	Right-handed 310
Helix 118	AN1	D	242	251	Right-handed alpha
Helix 119	AN2	D	252	262	Right-handed alpha
Helix 120	AN3	D	280	285	Right-handed alpha
Helix 121	AN4	D	291	298	Right-handed alpha
Helix 122	AN5	D	302	307	Right-handed 310
Helix 123	AN6	D	310	324	Right-handed alpha
Helix 124	AN7	D	324	349	Right-handed alpha
Helix 125	AN8	D	372	377	Right-handed alpha
Helix 126	AN9	D	379	411	Right-handed alpha
Helix 127	AO1	D	411	418	Right-handed alpha
Helix 128	AO2	D	422	445	Right-handed alpha
Helix 129	AO3	D	450	464	Right-handed alpha
Helix 130	AO4	D	465	472	Right-handed 310
Helix 131	AO5	D	475	487	Right-handed alpha
Helix 132	AO6	D	488	512	Right-handed alpha
Helix 133	AO7	D	525	538	Right-handed alpha
Helix 134	AO8	D	552	566	Right-handed alpha
Helix 135	AO9	D	569	585	Right-handed alpha
Helix 136	AP1	D	585	608	Right-handed alpha

There are 8 sheets in PDB entry 8FHH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	268	first strand
Strand 2	A	273	279	anti-parallel
Strand 3	A	629	636	anti-parallel
Strand 4	A	618	619	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	354	first strand
Strand 2	A	368	370	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	268	first strand
Strand 2	B	273	279	anti-parallel
Strand 3	B	629	636	anti-parallel
Strand 4	B	618	619	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	354	first strand
Strand 2	B	368	370	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	268	first strand
Strand 2	C	273	279	anti-parallel
Strand 3	C	629	636	anti-parallel
Strand 4	C	618	619	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	352	354	first strand
Strand 2	C	368	370	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	266	268	first strand
Strand 2	D	273	279	anti-parallel
Strand 3	D	629	636	anti-parallel
Strand 4	D	618	619	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	352	354	first strand
Strand 2	D	368	370	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FHH

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FHH