Analysis of interatomic Contacts of Structural Units in PDB entry:
8FHJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FHJ entry

There are 3 chains in PDB entry 8FHJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	ASP 532
B	SER 2	ASP 532
C	SER 2	ASP 254

There are 56 helices in PDB entry 8FHJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	27	Right-handed alpha
Helix 2	AA2	A	50	58	Right-handed alpha
Helix 3	AA3	A	62	70	Right-handed alpha
Helix 4	AA4	A	96	102	Right-handed alpha
Helix 5	AA5	A	115	129	Right-handed alpha
Helix 6	AA6	A	178	183	Right-handed alpha
Helix 7	AA7	A	204	209	Right-handed alpha
Helix 8	AA8	A	249	253	Right-handed 310
Helix 9	AA9	A	254	267	Right-handed alpha
Helix 10	AB1	A	300	302	Right-handed 310
Helix 11	AB2	A	312	333	Right-handed alpha
Helix 12	AB3	A	337	341	Right-handed 310
Helix 13	AB4	A	342	367	Right-handed alpha
Helix 14	AB5	A	371	375	Right-handed 310
Helix 15	AB6	A	376	380	Right-handed 310
Helix 16	AB7	A	382	389	Right-handed alpha
Helix 17	AB8	A	437	440	Right-handed 310
Helix 18	AB9	A	452	466	Right-handed alpha
Helix 19	AC1	A	516	528	Right-handed alpha
Helix 20	AC2	B	14	27	Right-handed alpha
Helix 21	AC3	B	50	58	Right-handed alpha
Helix 22	AC4	B	62	70	Right-handed alpha
Helix 23	AC5	B	96	102	Right-handed alpha
Helix 24	AC6	B	115	129	Right-handed alpha
Helix 25	AC7	B	178	183	Right-handed alpha
Helix 26	AC8	B	204	209	Right-handed alpha
Helix 27	AC9	B	249	253	Right-handed 310
Helix 28	AD1	B	254	267	Right-handed alpha
Helix 29	AD2	B	300	302	Right-handed 310
Helix 30	AD3	B	312	333	Right-handed alpha
Helix 31	AD4	B	337	341	Right-handed 310
Helix 32	AD5	B	342	367	Right-handed alpha
Helix 33	AD6	B	371	375	Right-handed 310
Helix 34	AD7	B	376	380	Right-handed 310
Helix 35	AD8	B	382	389	Right-handed alpha
Helix 36	AD9	B	437	440	Right-handed 310
Helix 37	AE1	B	452	463	Right-handed alpha
Helix 38	AE2	B	516	529	Right-handed alpha
Helix 39	AE3	C	14	27	Right-handed alpha
Helix 40	AE4	C	50	59	Right-handed alpha
Helix 41	AE5	C	62	70	Right-handed alpha
Helix 42	AE6	C	96	102	Right-handed alpha
Helix 43	AE7	C	115	129	Right-handed alpha
Helix 44	AE8	C	178	183	Right-handed alpha
Helix 45	AE9	C	249	253	Right-handed 310
Helix 46	AF1	C	254	267	Right-handed alpha
Helix 47	AF2	C	300	302	Right-handed 310
Helix 48	AF3	C	312	333	Right-handed alpha
Helix 49	AF4	C	337	341	Right-handed 310
Helix 50	AF5	C	342	367	Right-handed alpha
Helix 51	AF6	C	371	375	Right-handed 310
Helix 52	AF7	C	376	380	Right-handed 310
Helix 53	AF8	C	382	389	Right-handed alpha
Helix 54	AF9	C	437	440	Right-handed 310
Helix 55	AG1	C	452	466	Right-handed alpha
Helix 56	AG2	C	516	528	Right-handed alpha

There are 18 sheets in PDB entry 8FHJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	132	134	first strand
Strand 2	A	31	34	parallel
Strand 3	A	4	11	parallel
Strand 4	A	161	171	parallel
Strand 5	A	149	155	anti-parallel
Strand 6	A	137	144	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	132	134	first strand
Strand 2	A	31	34	parallel
Strand 3	A	4	11	parallel
Strand 4	A	161	171	parallel
Strand 5	A	296	298	parallel
Strand 6	A	292	293	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	49	first strand
Strand 2	A	111	114	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	95	first strand
Strand 2	A	78	83	anti-parallel
Strand 3	A	214	220	parallel
Strand 4	A	225	230	anti-parallel
Strand 5	A	236	243	anti-parallel
Strand 6	A	187	202	anti-parallel
Strand 7	A	274	288	anti-parallel
Strand 8	A	304	305	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	426	429	first strand
Strand 2	A	432	435	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	471	474	first strand
Strand 2	A	445	448	parallel
Strand 3	A	497	500	anti-parallel
Strand 4	A	506	510	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	134	first strand
Strand 2	B	31	34	parallel
Strand 3	B	3	11	parallel
Strand 4	B	161	171	parallel
Strand 5	B	148	155	anti-parallel
Strand 6	B	137	145	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	134	first strand
Strand 2	B	31	34	parallel
Strand 3	B	3	11	parallel
Strand 4	B	161	171	parallel
Strand 5	B	296	298	parallel
Strand 6	B	292	293	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	49	first strand
Strand 2	B	111	114	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	95	first strand
Strand 2	B	78	83	anti-parallel
Strand 3	B	214	220	parallel
Strand 4	B	225	230	anti-parallel
Strand 5	B	236	243	anti-parallel
Strand 6	B	187	202	anti-parallel
Strand 7	B	274	288	anti-parallel
Strand 8	B	304	305	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	426	429	first strand
Strand 2	B	432	435	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	470	474	first strand
Strand 2	B	444	448	parallel
Strand 3	B	497	500	anti-parallel
Strand 4	B	506	510	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	132	134	first strand
Strand 2	C	31	34	parallel
Strand 3	C	4	11	parallel
Strand 4	C	161	171	parallel
Strand 5	C	149	155	anti-parallel
Strand 6	C	137	144	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	132	134	first strand
Strand 2	C	31	34	parallel
Strand 3	C	4	11	parallel
Strand 4	C	161	171	parallel
Strand 5	C	296	298	parallel
Strand 6	C	292	293	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	49	first strand
Strand 2	C	111	114	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	92	95	first strand
Strand 2	C	78	83	anti-parallel
Strand 3	C	214	220	parallel
Strand 4	C	225	230	anti-parallel
Strand 5	C	236	243	anti-parallel
Strand 6	C	187	202	anti-parallel
Strand 7	C	274	288	anti-parallel
Strand 8	C	304	305	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	426	429	first strand
Strand 2	C	432	435	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	470	474	first strand
Strand 2	C	444	448	parallel
Strand 3	C	497	500	anti-parallel
Strand 4	C	506	510	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FHJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FHJ