Analysis of interatomic Contacts of Structural Units in PDB entry:
8FIA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FIA entry

There is 1 chain in PDB entry 8FIA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 828ARG 2128
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8FIA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
833 839Right-handed alpha
Helix 2
AA2
A
840 843Right-handed 310
Helix 3
AA3
A
847 852Right-handed alpha
Helix 4
AA4
A
972 975Right-handed 310
Helix 5
AA5
A
1011 1013Right-handed 310
Helix 6
AA6
A
1141 1143Right-handed 310
Helix 7
AA7
A
1169 1171Right-handed 310
Helix 8
AA8
A
1398 1402Right-handed 310
Helix 9
AA9
A
1492 1494Right-handed 310
Helix 10
AB1
A
1721 1726Right-handed alpha
Helix 11
AB2
A
1728 1735Right-handed alpha
Helix 12
AB3
A
1963 1966Right-handed 310
Helix 13
AB4
A
2357 2361Right-handed 310
Helix 14
AB5
A
2390 2395Right-handed alpha
Helix 15
AB6
A
2398 2403Right-handed 310
Helix 16
AB7
A
2407 2411Right-handed 310
Helix 17
AB8
A
2424 2432Right-handed alpha
Helix 18
AB9
A
2435 2439Right-handed 310
Helix 19
AC1
A
2440 2448Right-handed alpha
Helix 20
AC2
A
2469 2484Right-handed alpha
Helix 21
AC3
A
2538 2547Right-handed alpha
Helix 22
AC4
A
2572 2582Right-handed alpha
Helix 23
AC5
A
2622 2635Right-handed alpha
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There are 19 sheets in PDB entry 8FIA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
898 904first strand
Strand 2
A
861 869anti-parallel
Strand 3
A
932 934parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
898 904first strand
Strand 2
A
861 869anti-parallel
Strand 3
A
938 939parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
890 892first strand
Strand 2
A
880 883anti-parallel
Strand 3
A
908 914anti-parallel
Strand 4
A
921 926anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
967 970first strand
Strand 2
A
1018 1023anti-parallel
Strand 3
A
1058 1063anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1116 1117first strand
Strand 2
A
1005 1009anti-parallel
Strand 3
A
992 998anti-parallel
Strand 4
A
985 987anti-parallel
Strand 5
A
2467 2468parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1045 1052first strand
Strand 2
A
1033 1042anti-parallel
Strand 3
A
1077 1087anti-parallel
Strand 4
A
1094 1102anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1121 1124first strand
Strand 2
A
1129 1132anti-parallel
Strand 3
A
1137 1139anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1146 1151first strand
Strand 2
A
1495 1500anti-parallel
Strand 3
A
1486 1490anti-parallel
Strand 4
A
1475 1480anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1166 1167first strand
Strand 2
A
1203 1209anti-parallel
Strand 3
A
1194 1198anti-parallel
Strand 4
A
1187 1191anti-parallel
Strand 5
A
1176 1181anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1220 1223first strand
Strand 2
A
1230 1234anti-parallel
Strand 3
A
1239 1242anti-parallel
Strand 4
A
1257 1260anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1288 1293first strand
Strand 2
A
1299 1303anti-parallel
Strand 3
A
1306 1310anti-parallel
Strand 4
A
1316 1320anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1337 1338first strand
Strand 2
A
1376 1381anti-parallel
Strand 3
A
1367 1372anti-parallel
Strand 4
A
1360 1364anti-parallel
Strand 5
A
1351 1353anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1407 1412first strand
Strand 2
A
1418 1423anti-parallel
Strand 3
A
1429 1434anti-parallel
Strand 4
A
1440 1444anti-parallel
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There are 62 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1512 1516first strand
Strand 2
A
1521 1525anti-parallel
Strand 3
A
1531 1536anti-parallel
Strand 4
A
1542 1548anti-parallel
Strand 5
A
1557 1561anti-parallel
Strand 6
A
1567 1572anti-parallel
Strand 7
A
1578 1582anti-parallel
Strand 8
A
1588 1593anti-parallel
Strand 9
A
1599 1603anti-parallel
Strand 10
A
1609 1614anti-parallel
Strand 11
A
1621 1626anti-parallel
Strand 12
A
1631 1636anti-parallel
Strand 13
A
1642 1646anti-parallel
Strand 14
A
1652 1660anti-parallel
Strand 15
A
1663 1670anti-parallel
Strand 16
A
1673 1681anti-parallel
Strand 17
A
1684 1689anti-parallel
Strand 18
A
1692 1698anti-parallel
Strand 19
A
1704 1707anti-parallel
Strand 20
A
1712 1719anti-parallel
Strand 21
A
1737 1745anti-parallel
Strand 22
A
1748 1761anti-parallel
Strand 23
A
1778 1787anti-parallel
Strand 24
A
1790 1798anti-parallel
Strand 25
A
1803 1808anti-parallel
Strand 26
A
1812 1819anti-parallel
Strand 27
A
1825 1830anti-parallel
Strand 28
A
1838 1842anti-parallel
Strand 29
A
1848 1853anti-parallel
Strand 30
A
1856 1862anti-parallel
Strand 31
A
1868 1873anti-parallel
Strand 32
A
1878 1882anti-parallel
Strand 33
A
1893 1895anti-parallel
Strand 34
A
1901 1906anti-parallel
Strand 35
A
1912 1916anti-parallel
Strand 36
A
1922 1929anti-parallel
Strand 37
A
1934 1939anti-parallel
Strand 38
A
1947 1951anti-parallel
Strand 39
A
1957 1961anti-parallel
Strand 40
A
1968 1973anti-parallel
Strand 41
A
1979 1984anti-parallel
Strand 42
A
1987 1993anti-parallel
Strand 43
A
2000 2007anti-parallel
Strand 44
A
2010 2019anti-parallel
Strand 45
A
2022 2030anti-parallel
Strand 46
A
2039 2045anti-parallel
Strand 47
A
2051 2058anti-parallel
Strand 48
A
2066 2070anti-parallel
Strand 49
A
2077 2080anti-parallel
Strand 50
A
2083 2088anti-parallel
Strand 51
A
2092 2097anti-parallel
Strand 52
A
2102 2108anti-parallel
Strand 53
A
2114 2121anti-parallel
Strand 54
A
2124 2133anti-parallel
Strand 55
A
2139 2146anti-parallel
Strand 56
A
2149 2157anti-parallel
Strand 57
A
2163 2168anti-parallel
Strand 58
A
2171 2176anti-parallel
Strand 59
A
2182 2187anti-parallel
Strand 60
A
2190 2196anti-parallel
Strand 61
A
2202 2205anti-parallel
Strand 62
A
2208 2209anti-parallel
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There are 14 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2061 2062first strand
Strand 2
A
2051 2058anti-parallel
Strand 3
A
2039 2045anti-parallel
Strand 4
A
2022 2030anti-parallel
Strand 5
A
2010 2019anti-parallel
Strand 6
A
2000 2007anti-parallel
Strand 7
A
1987 1993anti-parallel
Strand 8
A
1979 1984anti-parallel
Strand 9
A
1968 1973anti-parallel
Strand 10
A
1957 1961anti-parallel
Strand 11
A
1947 1951anti-parallel
Strand 12
A
1934 1939anti-parallel
Strand 13
A
1922 1929anti-parallel
Strand 14
A
2508 2509parallel
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There are 14 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2211 2213first strand
Strand 2
A
2219 2222anti-parallel
Strand 3
A
2225 2229anti-parallel
Strand 4
A
2235 2240anti-parallel
Strand 5
A
2244 2250anti-parallel
Strand 6
A
2256 2261anti-parallel
Strand 7
A
2266 2270anti-parallel
Strand 8
A
2282 2285anti-parallel
Strand 9
A
2290 2296anti-parallel
Strand 10
A
2302 2307anti-parallel
Strand 11
A
2310 2316anti-parallel
Strand 12
A
2322 2326anti-parallel
Strand 13
A
2332 2338anti-parallel
Strand 14
A
2344 2347anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2362 2363first strand
Strand 2
A
2370 2372anti-parallel
Strand 3
A
2375 2378anti-parallel
Strand 4
A
2383 2384anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2517 2522first strand
Strand 2
A
2525 2530anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2555 2558first strand
Strand 2
A
2561 2568anti-parallel
Strand 3
A
2613 2619parallel
Strand 4
A
2606 2609anti-parallel
Strand 5
A
2589 2591anti-parallel
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