Analysis of interatomic Contacts of Structural Units in PDB entry:
8FIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FIE entry

There is 1 chain in PDB entry 8FIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 15GLY 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 8FIE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 23Right-handed alpha
Helix 2
AA2
A
30 41Right-handed alpha
Helix 3
AA3
A
55 65Right-handed alpha
Helix 4
AA4
A
74 82Right-handed alpha
Helix 5
AA5
A
83 86Right-handed 310
Helix 6
AA6
A
88 96Right-handed alpha
Helix 7
AA7
A
97 101Right-handed 310
Helix 8
AA8
A
104 117Right-handed alpha
Helix 9
AA9
A
118 124Right-handed alpha
Helix 10
AB1
A
125 146Right-handed alpha
Helix 11
AB2
A
152 156Right-handed alpha
Helix 12
AB3
A
158 170Right-handed alpha
Helix 13
AB4
A
172 190Right-handed alpha
Helix 14
AB5
A
195 223Right-handed alpha
Helix 15
AB6
A
227 234Right-handed alpha
Helix 16
AB7
A
244 259Right-handed alpha
Helix 17
AB8
A
261 277Right-handed alpha
Helix 18
AB9
A
278 286Right-handed 310
Helix 19
AC1
A
287 302Right-handed alpha
Helix 20
AC2
A
334 340Right-handed alpha
Helix 21
AC3
A
352 357Right-handed 310
Helix 22
AC4
A
375 379Right-handed 310
Helix 23
AC5
A
382 401Right-handed alpha
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There are 4 sheets in PDB entry 8FIE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 45first strand
Strand 2
A
51 53anti-parallel
Strand 3
A
330 333parallel
Strand 4
A
312 314anti-parallel
Strand 5
A
70 71anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 151first strand
Strand 2
A
425 428anti-parallel
Strand 3
A
404 406anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 320first strand
Strand 2
A
323 325anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 413first strand
Strand 2
A
420 423anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il