Analysis of interatomic Contacts of Structural Units in PDB entry:
8FIY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FIY entry

There are 7 chains in PDB entry 8FIY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 7	LEU 234
B	SER 4	VAL 232
C	VAL 2	GLU 1342
D	GLU 16	ARG 1373
N	T 9	C 23
T	G 4	G 26
R	C 1	U 9

There are 97 helices in PDB entry 8FIY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	50	Right-handed alpha
Helix 2	AA2	A	78	86	Right-handed alpha
Helix 3	AA3	A	113	115	Right-handed 310
Helix 4	AA4	A	154	162	Right-handed alpha
Helix 5	AA5	A	212	217	Right-handed alpha
Helix 6	AA6	A	217	225	Right-handed alpha
Helix 7	AA7	B	35	39	Right-handed 310
Helix 8	AA8	B	44	49	Right-handed alpha
Helix 9	AA9	B	77	87	Right-handed alpha
Helix 10	AB1	B	212	217	Right-handed 310
Helix 11	AB2	B	223	231	Right-handed alpha
Helix 12	AB3	C	4	10	Right-handed alpha
Helix 13	AB4	C	31	39	Right-handed alpha
Helix 14	AB5	C	48	55	Right-handed alpha
Helix 15	AB6	C	84	89	Right-handed alpha
Helix 16	AB7	C	205	213	Right-handed alpha
Helix 17	AB8	C	217	222	Right-handed alpha
Helix 18	AB9	C	242	247	Right-handed alpha
Helix 19	AC1	C	270	279	Right-handed alpha
Helix 20	AC2	C	291	295	Right-handed 310
Helix 21	AC3	C	318	326	Right-handed alpha
Helix 22	AC4	C	349	354	Right-handed alpha
Helix 23	AC5	C	360	369	Right-handed alpha
Helix 24	AC6	C	377	389	Right-handed alpha
Helix 25	AC7	C	398	409	Right-handed alpha
Helix 26	AC8	C	421	438	Right-handed alpha
Helix 27	AC9	C	447	449	Right-handed 310
Helix 28	AD1	C	455	481	Right-handed alpha
Helix 29	AD2	C	495	508	Right-handed alpha
Helix 30	AD3	C	519	528	Right-handed alpha
Helix 31	AD4	C	607	614	Right-handed alpha
Helix 32	AD5	C	656	660	Right-handed 310
Helix 33	AD6	C	675	678	Right-handed 310
Helix 34	AD7	C	679	684	Right-handed alpha
Helix 35	AD8	C	704	712	Right-handed alpha
Helix 36	AD9	C	858	865	Right-handed alpha
Helix 37	AE1	C	942	981	Right-handed alpha
Helix 38	AE2	C	1005	1025	Right-handed alpha
Helix 39	AE3	C	1025	1035	Right-handed alpha
Helix 40	AE4	C	1111	1134	Right-handed alpha
Helix 41	AE5	C	1137	1150	Right-handed alpha
Helix 42	AE6	C	1165	1174	Right-handed alpha
Helix 43	AE7	C	1191	1202	Right-handed alpha
Helix 44	AE8	C	1272	1281	Right-handed alpha
Helix 45	AE9	C	1286	1291	Right-handed alpha
Helix 46	AF1	C	1297	1309	Right-handed alpha
Helix 47	AF2	C	1322	1332	Right-handed alpha
Helix 48	AF3	D	26	34	Right-handed alpha
Helix 49	AF4	D	95	101	Right-handed alpha
Helix 50	AF5	D	113	118	Right-handed alpha
Helix 51	AF6	D	122	128	Right-handed alpha
Helix 52	AF7	D	131	139	Right-handed alpha
Helix 53	AF8	D	165	173	Right-handed alpha
Helix 54	AF9	D	174	176	Right-handed 310
Helix 55	AG1	D	181	192	Right-handed alpha
Helix 56	AG2	D	194	205	Right-handed alpha
Helix 57	AG3	D	210	226	Right-handed alpha
Helix 58	AG4	D	263	284	Right-handed alpha
Helix 59	AG5	D	288	308	Right-handed alpha
Helix 60	AG6	D	336	341	Right-handed alpha
Helix 61	AG7	D	369	375	Right-handed alpha
Helix 62	AG8	D	377	389	Right-handed alpha
Helix 63	AG9	D	393	399	Right-handed alpha
Helix 64	AH1	D	407	414	Right-handed alpha
Helix 65	AH2	D	450	457	Right-handed alpha
Helix 66	AH3	D	474	479	Right-handed alpha
Helix 67	AH4	D	503	515	Right-handed alpha
Helix 68	AH5	D	529	539	Right-handed alpha
Helix 69	AH6	D	573	581	Right-handed alpha
Helix 70	AH7	D	588	592	Right-handed 310
Helix 71	AH8	D	597	613	Right-handed alpha
Helix 72	AH9	D	614	635	Right-handed alpha
Helix 73	AI1	D	640	644	Right-handed 310
Helix 74	AI2	D	649	658	Right-handed alpha
Helix 75	AI3	D	658	670	Right-handed alpha
Helix 76	AI4	D	674	697	Right-handed alpha
Helix 77	AI5	D	697	702	Right-handed alpha
Helix 78	AI6	D	720	729	Right-handed alpha
Helix 79	AI7	D	733	738	Right-handed alpha
Helix 80	AI8	D	768	802	Right-handed alpha
Helix 81	AI9	D	866	876	Right-handed alpha
Helix 82	AJ1	D	895	900	Right-handed alpha
Helix 83	AJ2	D	915	920	Right-handed alpha
Helix 84	AJ3	D	920	925	Right-handed alpha
Helix 85	AJ4	D	926	930	Right-handed 310
Helix 86	AJ5	D	1068	1074	Right-handed alpha
Helix 87	AJ6	D	1138	1147	Right-handed alpha
Helix 88	AJ7	D	1217	1225	Right-handed alpha
Helix 89	AJ8	D	1228	1233	Right-handed alpha
Helix 90	AJ9	D	1237	1245	Right-handed alpha
Helix 91	AK1	D	1250	1255	Right-handed alpha
Helix 92	AK2	D	1282	1295	Right-handed alpha
Helix 93	AK3	D	1309	1316	Right-handed alpha
Helix 94	AK4	D	1318	1324	Right-handed alpha
Helix 95	AK5	D	1331	1338	Right-handed alpha
Helix 96	AK6	D	1347	1352	Right-handed alpha
Helix 97	AK7	D	1362	1367	Right-handed alpha

There are 37 sheets in PDB entry 8FIY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	24	25	first strand
Strand 2	A	199	206	anti-parallel
Strand 3	A	182	189	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	99	first strand
Strand 2	A	144	146	anti-parallel
Strand 3	A	56	60	anti-parallel
Strand 4	A	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	92	first strand
Strand 2	A	121	123	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	111	first strand
Strand 2	A	129	133	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	175	177	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	142	145	first strand
Strand 2	B	58	61	anti-parallel
Strand 3	B	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	92	first strand
Strand 2	B	121	122	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	110	first strand
Strand 2	B	131	133	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1182	1183	parallel
Strand 3	C	700	701	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	74	first strand
Strand 2	C	94	103	anti-parallel
Strand 3	C	117	127	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	137	first strand
Strand 2	C	142	145	anti-parallel
Strand 3	C	512	514	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	454	first strand
Strand 2	C	147	151	anti-parallel
Strand 3	C	530	531	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	156	158	first strand
Strand 2	C	173	175	anti-parallel
Strand 3	C	185	189	anti-parallel
Strand 4	C	193	194	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	255	256	first strand
Strand 2	C	261	263	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	302	first strand
Strand 2	C	309	311	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	594	anti-parallel
Strand 3	C	599	606	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	594	anti-parallel
Strand 3	C	652	654	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	634	637	first strand
Strand 2	C	642	645	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	716	717	first strand
Strand 2	C	782	785	anti-parallel
Strand 3	C	768	769	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	789	790	first strand
Strand 2	C	793	794	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1096	1098	first strand
Strand 2	C	798	804	parallel
Strand 3	C	1227	1232	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	816	819	first strand
Strand 2	C	1074	1080	parallel
Strand 3	C	1065	1066	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	832	833	first strand
Strand 2	C	1055	1056	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	836	840	first strand
Strand 2	C	1048	1052	anti-parallel
Strand 3	C	931	934	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	849	850	first strand
Strand 2	C	886	887	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1244	1246	first strand
Strand 2	D	350	352	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1335	1336	first strand
Strand 2	D	23	24	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	354	356	first strand
Strand 2	D	446	448	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	435	437	first strand
Strand 2	D	421	425	anti-parallel
Strand 3	D	466	469	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	548	549	first strand
Strand 2	D	571	572	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	552	554	first strand
Strand 2	D	566	568	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	706	709	first strand
Strand 2	D	712	715	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	991	996	first strand
Strand 2	D	981	985	anti-parallel
Strand 3	D	956	961	anti-parallel
Strand 4	D	1009	1011	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1028	1029	first strand
Strand 2	D	1119	1120	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1046	1047	first strand
Strand 2	D	1060	1061	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1162	1163	first strand
Strand 2	D	1175	1178	anti-parallel
Strand 3	D	1187	1188	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1279	1281	first strand
Strand 2	D	1263	1266	anti-parallel
Strand 3	D	1302	1304	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FIY

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FIY