Analysis of interatomic Contacts of Structural Units in PDB entry:
8FJZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FJZ entry

There are 6 chains in PDB entry 8FJZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 3	LYS 292
B	ASP 5	LYS 292
C	ASP 5	LYS 292
D	ASP 5	LYS 292
E	PRO 6	LYS 292
F	PHE 9	LYS 292

There are 77 helices in PDB entry 8FJZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	12	15	Right-handed 310
Helix 2	AA2	A	56	69	Right-handed alpha
Helix 3	AA3	A	98	107	Right-handed alpha
Helix 4	AA4	A	110	131	Right-handed alpha
Helix 5	AA5	A	139	141	Right-handed 310
Helix 6	AA6	A	156	172	Right-handed alpha
Helix 7	AA7	A	180	190	Right-handed alpha
Helix 8	AA8	A	195	211	Right-handed alpha
Helix 9	AA9	A	219	228	Right-handed alpha
Helix 10	AB1	A	239	243	Right-handed 310
Helix 11	AB2	A	244	255	Right-handed alpha
Helix 12	AB3	A	264	269	Right-handed alpha
Helix 13	AB4	A	281	292	Right-handed alpha
Helix 14	AB5	B	12	15	Right-handed 310
Helix 15	AB6	B	56	69	Right-handed alpha
Helix 16	AB7	B	98	107	Right-handed alpha
Helix 17	AB8	B	110	131	Right-handed alpha
Helix 18	AB9	B	139	141	Right-handed 310
Helix 19	AC1	B	156	170	Right-handed alpha
Helix 20	AC2	B	180	189	Right-handed alpha
Helix 21	AC3	B	195	211	Right-handed alpha
Helix 22	AC4	B	219	229	Right-handed alpha
Helix 23	AC5	B	239	243	Right-handed 310
Helix 24	AC6	B	244	255	Right-handed alpha
Helix 25	AC7	B	264	270	Right-handed alpha
Helix 26	AC8	B	271	276	Right-handed alpha
Helix 27	AC9	B	281	289	Right-handed alpha
Helix 28	AD1	C	12	15	Right-handed 310
Helix 29	AD2	C	56	69	Right-handed alpha
Helix 30	AD3	C	98	107	Right-handed alpha
Helix 31	AD4	C	110	131	Right-handed alpha
Helix 32	AD5	C	156	173	Right-handed alpha
Helix 33	AD6	C	180	190	Right-handed alpha
Helix 34	AD7	C	195	211	Right-handed alpha
Helix 35	AD8	C	219	228	Right-handed alpha
Helix 36	AD9	C	244	255	Right-handed alpha
Helix 37	AE1	C	264	270	Right-handed alpha
Helix 38	AE2	C	271	276	Right-handed alpha
Helix 39	AE3	C	281	292	Right-handed alpha
Helix 40	AE4	D	12	15	Right-handed 310
Helix 41	AE5	D	56	69	Right-handed alpha
Helix 42	AE6	D	98	107	Right-handed alpha
Helix 43	AE7	D	110	131	Right-handed alpha
Helix 44	AE8	D	139	141	Right-handed 310
Helix 45	AE9	D	156	168	Right-handed alpha
Helix 46	AF1	D	180	189	Right-handed alpha
Helix 47	AF2	D	195	211	Right-handed alpha
Helix 48	AF3	D	219	228	Right-handed alpha
Helix 49	AF4	D	244	255	Right-handed alpha
Helix 50	AF5	D	264	269	Right-handed alpha
Helix 51	AF6	D	271	276	Right-handed alpha
Helix 52	AF7	D	281	292	Right-handed alpha
Helix 53	AF8	E	12	15	Right-handed 310
Helix 54	AF9	E	56	69	Right-handed alpha
Helix 55	AG1	E	98	107	Right-handed alpha
Helix 56	AG2	E	110	131	Right-handed alpha
Helix 57	AG3	E	139	141	Right-handed 310
Helix 58	AG4	E	156	172	Right-handed alpha
Helix 59	AG5	E	180	190	Right-handed alpha
Helix 60	AG6	E	195	211	Right-handed alpha
Helix 61	AG7	E	219	229	Right-handed alpha
Helix 62	AG8	E	244	255	Right-handed alpha
Helix 63	AG9	E	264	269	Right-handed alpha
Helix 64	AH1	E	271	276	Right-handed alpha
Helix 65	AH2	E	281	292	Right-handed alpha
Helix 66	AH3	F	12	15	Right-handed 310
Helix 67	AH4	F	56	69	Right-handed alpha
Helix 68	AH5	F	98	107	Right-handed alpha
Helix 69	AH6	F	110	131	Right-handed alpha
Helix 70	AH7	F	139	141	Right-handed 310
Helix 71	AH8	F	156	172	Right-handed alpha
Helix 72	AH9	F	180	190	Right-handed alpha
Helix 73	AI1	F	195	211	Right-handed alpha
Helix 74	AI2	F	219	227	Right-handed alpha
Helix 75	AI3	F	244	255	Right-handed alpha
Helix 76	AI4	F	264	269	Right-handed alpha
Helix 77	AI5	F	281	292	Right-handed alpha

There are 12 sheets in PDB entry 8FJZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	25	first strand
Strand 2	A	30	36	anti-parallel
Strand 3	A	42	49	anti-parallel
Strand 4	A	86	92	anti-parallel
Strand 5	A	77	83	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	145	first strand
Strand 2	A	151	153	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	25	first strand
Strand 2	B	30	36	anti-parallel
Strand 3	B	42	49	anti-parallel
Strand 4	B	86	92	anti-parallel
Strand 5	B	77	83	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	143	145	first strand
Strand 2	B	151	153	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	17	24	first strand
Strand 2	C	30	36	anti-parallel
Strand 3	C	42	49	anti-parallel
Strand 4	C	86	92	anti-parallel
Strand 5	C	77	83	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	145	first strand
Strand 2	C	151	153	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	25	first strand
Strand 2	D	30	36	anti-parallel
Strand 3	D	42	48	anti-parallel
Strand 4	D	87	92	anti-parallel
Strand 5	D	77	82	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	143	145	first strand
Strand 2	D	151	153	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	17	25	first strand
Strand 2	E	30	36	anti-parallel
Strand 3	E	42	48	anti-parallel
Strand 4	E	87	92	anti-parallel
Strand 5	E	77	82	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	143	145	first strand
Strand 2	E	151	153	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	17	25	first strand
Strand 2	F	30	36	anti-parallel
Strand 3	F	42	48	anti-parallel
Strand 4	F	87	92	anti-parallel
Strand 5	F	77	82	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	143	145	first strand
Strand 2	F	151	153	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FJZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FJZ