Analysis of interatomic Contacts of Structural Units in PDB entry:
8FKL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FKL entry

There is 1 chain in PDB entry 8FKL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 233PRO 742
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8FKL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
233 242Right-handed alpha
Helix 2
AA2
A
242 249Right-handed alpha
Helix 3
AA3
A
250 254Right-handed 310
Helix 4
AA4
A
267 283Right-handed alpha
Helix 5
AA5
A
287 293Right-handed alpha
Helix 6
AA6
A
305 312Right-handed alpha
Helix 7
AA7
A
320 332Right-handed alpha
Helix 8
AA8
A
334 338Right-handed 310
Helix 9
AA9
A
342 347Right-handed alpha
Helix 10
AB1
A
374 387Right-handed alpha
Helix 11
AB2
A
397 413Right-handed alpha
Helix 12
AB3
A
423 432Right-handed alpha
Helix 13
AB4
A
443 447Right-handed alpha
Helix 14
AB5
A
460 475Right-handed alpha
Helix 15
AB6
A
509 514Right-handed alpha
Helix 16
AB7
A
540 544Right-handed 310
Helix 17
AB8
A
565 572Right-handed 310
Helix 18
AB9
A
632 637Right-handed alpha
Helix 19
AC1
A
653 656Right-handed 310
Helix 20
AC2
A
657 665Right-handed alpha
Helix 21
AC3
A
665 672Right-handed alpha
Helix 22
AC4
A
692 699Right-handed alpha
Helix 23
AC5
A
703 707Right-handed 310
Helix 24
AC6
A
718 732Right-handed alpha
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There are 4 sheets in PDB entry 8FKL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 299first strand
Strand 2
A
257 261parallel
Strand 3
A
735 740parallel
Strand 4
A
676 678parallel
Strand 5
A
640 642parallel
Strand 6
A
438 442parallel
Strand 7
A
364 366parallel
Strand 8
A
318 319parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 355first strand
Strand 2
A
479 486anti-parallel
Strand 3
A
489 496anti-parallel
Strand 4
A
517 522anti-parallel
Strand 5
A
597 605anti-parallel
Strand 6
A
547 554anti-parallel
Strand 7
A
573 574anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
559 561first strand
Strand 2
A
547 554anti-parallel
Strand 3
A
597 605anti-parallel
Strand 4
A
591 592anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 538first strand
Strand 2
A
580 583anti-parallel
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