Analysis of interatomic Contacts of Structural Units in PDB entry:
8FLJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FLJ entry

There are 14 chains in PDB entry 8FLJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 12	THR 321
B	SER 5	THR 321
C	ASN 19	THR 321
D	GLU 8	VAL 322
E	ALA 5	ALA 98
F	GLY 1	GLU 94
G	ALA 5	SER 102
H	GLY 1	GLU 94
I	A 1	A 139
J	G 153	T 300
K	G 1	C 36
L	G 1	A 27
M	MET 1	GLU 1059
N	MET 1	GLU 1059

There are174 helices in PDB entry 8FLJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	41	50	Right-handed 310
Helix 2	AA2	A	68	78	Right-handed alpha
Helix 3	AA3	A	86	89	Right-handed 310
Helix 4	AA4	A	114	124	Right-handed alpha
Helix 5	AA5	A	125	150	Right-handed alpha
Helix 6	AA6	A	152	158	Right-handed alpha
Helix 7	AA7	A	163	178	Right-handed alpha
Helix 8	AA8	A	182	206	Right-handed alpha
Helix 9	AA9	A	220	245	Right-handed alpha
Helix 10	AB1	A	260	286	Right-handed alpha
Helix 11	AB2	A	288	304	Right-handed alpha
Helix 12	AB3	A	304	321	Right-handed alpha
Helix 13	AB4	B	13	17	Right-handed 310
Helix 14	AB5	B	51	55	Right-handed 310
Helix 15	AB6	B	68	78	Right-handed alpha
Helix 16	AB7	B	114	123	Right-handed alpha
Helix 17	AB8	B	125	151	Right-handed alpha
Helix 18	AB9	B	151	158	Right-handed alpha
Helix 19	AC1	B	162	180	Right-handed alpha
Helix 20	AC2	B	182	205	Right-handed alpha
Helix 21	AC3	B	220	244	Right-handed alpha
Helix 22	AC4	B	254	258	Right-handed 310
Helix 23	AC5	B	260	272	Right-handed alpha
Helix 24	AC6	B	275	286	Right-handed alpha
Helix 25	AC7	B	288	303	Right-handed alpha
Helix 26	AC8	B	304	320	Right-handed alpha
Helix 27	AC9	C	41	50	Right-handed 310
Helix 28	AD1	C	68	78	Right-handed alpha
Helix 29	AD2	C	85	89	Right-handed 310
Helix 30	AD3	C	114	124	Right-handed alpha
Helix 31	AD4	C	125	151	Right-handed alpha
Helix 32	AD5	C	151	157	Right-handed alpha
Helix 33	AD6	C	162	176	Right-handed alpha
Helix 34	AD7	C	177	180	Right-handed 310
Helix 35	AD8	C	182	206	Right-handed alpha
Helix 36	AD9	C	220	245	Right-handed alpha
Helix 37	AE1	C	260	286	Right-handed alpha
Helix 38	AE2	C	288	304	Right-handed alpha
Helix 39	AE3	C	304	321	Right-handed alpha
Helix 40	AE4	D	8	12	Right-handed 310
Helix 41	AE5	D	13	17	Right-handed 310
Helix 42	AE6	D	51	53	Right-handed 310
Helix 43	AE7	D	68	77	Right-handed alpha
Helix 44	AE8	D	86	89	Right-handed 310
Helix 45	AE9	D	113	124	Right-handed alpha
Helix 46	AF1	D	125	151	Right-handed alpha
Helix 47	AF2	D	151	158	Right-handed alpha
Helix 48	AF3	D	162	178	Right-handed alpha
Helix 49	AF4	D	182	204	Right-handed alpha
Helix 50	AF5	D	220	245	Right-handed alpha
Helix 51	AF6	D	253	257	Right-handed 310
Helix 52	AF7	D	261	286	Right-handed alpha
Helix 53	AF8	D	288	303	Right-handed alpha
Helix 54	AF9	D	304	322	Right-handed alpha
Helix 55	AG1	E	7	20	Right-handed alpha
Helix 56	AG2	E	22	43	Right-handed alpha
Helix 57	AG3	E	87	95	Right-handed alpha
Helix 58	AG4	F	6	14	Right-handed alpha
Helix 59	AG5	F	20	42	Right-handed alpha
Helix 60	AG6	F	85	93	Right-handed alpha
Helix 61	AG7	G	7	20	Right-handed alpha
Helix 62	AG8	G	22	43	Right-handed alpha
Helix 63	AG9	G	87	95	Right-handed alpha
Helix 64	AH1	H	5	16	Right-handed alpha
Helix 65	AH2	H	20	41	Right-handed alpha
Helix 66	AH3	H	85	93	Right-handed alpha
Helix 67	AH4	M	10	22	Right-handed alpha
Helix 68	AH5	M	38	52	Right-handed alpha
Helix 69	AH6	M	79	82	Right-handed 310
Helix 70	AH7	M	108	121	Right-handed alpha
Helix 71	AH8	M	122	123	Right-handed 310
Helix 72	AH9	M	124	128	Right-handed 310
Helix 73	AI1	M	129	138	Right-handed alpha
Helix 74	AI2	M	148	161	Right-handed alpha
Helix 75	AI3	M	166	176	Right-handed alpha
Helix 76	AI4	M	183	188	Right-handed 310
Helix 77	AI5	M	207	219	Right-handed alpha
Helix 78	AI6	M	230	236	Right-handed alpha
Helix 79	AI7	M	242	246	Right-handed 310
Helix 80	AI8	M	252	259	Right-handed alpha
Helix 81	AI9	M	266	269	Right-handed 310
Helix 82	AJ1	M	270	287	Right-handed alpha
Helix 83	AJ2	M	289	299	Right-handed alpha
Helix 84	AJ3	M	301	320	Right-handed alpha
Helix 85	AJ4	M	349	374	Right-handed alpha
Helix 86	AJ5	M	380	385	Right-handed alpha
Helix 87	AJ6	M	389	391	Right-handed 310
Helix 88	AJ7	M	392	412	Right-handed alpha
Helix 89	AJ8	M	425	438	Right-handed alpha
Helix 90	AJ9	M	456	468	Right-handed alpha
Helix 91	AK1	M	483	497	Right-handed alpha
Helix 92	AK2	M	499	503	Right-handed 310
Helix 93	AK3	M	517	522	Right-handed 310
Helix 94	AK4	M	523	528	Right-handed alpha
Helix 95	AK5	M	530	539	Right-handed alpha
Helix 96	AK6	M	546	550	Right-handed alpha
Helix 97	AK7	M	550	555	Right-handed alpha
Helix 98	AK8	M	561	570	Right-handed alpha
Helix 99	AK9	M	578	581	Right-handed 310
Helix 100	AL1	M	582	584	Right-handed 310
Helix 101	AL2	M	585	599	Right-handed alpha
Helix 102	AL3	M	611	631	Right-handed alpha
Helix 103	AL4	M	659	681	Right-handed alpha
Helix 104	AL5	M	698	704	Right-handed alpha
Helix 105	AL6	M	715	721	Right-handed alpha
Helix 106	AL7	M	739	753	Right-handed alpha
Helix 107	AL8	M	771	786	Right-handed alpha
Helix 108	AL9	M	795	799	Right-handed alpha
Helix 109	AM1	M	799	805	Right-handed alpha
Helix 110	AM2	M	821	826	Right-handed 310
Helix 111	AM3	M	841	852	Right-handed alpha
Helix 112	AM4	M	871	876	Right-handed alpha
Helix 113	AM5	M	913	918	Right-handed alpha
Helix 114	AM6	M	928	942	Right-handed alpha
Helix 115	AM7	M	954	959	Right-handed alpha
Helix 116	AM8	M	960	964	Right-handed 310
Helix 117	AM9	M	965	971	Right-handed alpha
Helix 118	AN1	M	1008	1011	Right-handed 310
Helix 119	AN2	M	1029	1042	Right-handed alpha
Helix 120	AN3	M	1044	1053	Right-handed alpha
Helix 121	AN4	N	10	22	Right-handed alpha
Helix 122	AN5	N	38	52	Right-handed alpha
Helix 123	AN6	N	79	82	Right-handed 310
Helix 124	AN7	N	108	124	Right-handed alpha
Helix 125	AN8	N	125	128	Right-handed 310
Helix 126	AN9	N	129	138	Right-handed alpha
Helix 127	AO1	N	148	162	Right-handed alpha
Helix 128	AO2	N	166	176	Right-handed alpha
Helix 129	AO3	N	183	188	Right-handed alpha
Helix 130	AO4	N	207	219	Right-handed alpha
Helix 131	AO5	N	230	235	Right-handed alpha
Helix 132	AO6	N	242	247	Right-handed 310
Helix 133	AO7	N	252	260	Right-handed alpha
Helix 134	AO8	N	266	269	Right-handed 310
Helix 135	AO9	N	270	287	Right-handed alpha
Helix 136	AP1	N	289	300	Right-handed alpha
Helix 137	AP2	N	300	320	Right-handed alpha
Helix 138	AP3	N	349	367	Right-handed alpha
Helix 139	AP4	N	369	374	Right-handed alpha
Helix 140	AP5	N	380	385	Right-handed alpha
Helix 141	AP6	N	389	391	Right-handed 310
Helix 142	AP7	N	392	404	Right-handed alpha
Helix 143	AP8	N	405	413	Right-handed alpha
Helix 144	AP9	N	425	438	Right-handed alpha
Helix 145	AQ1	N	456	468	Right-handed alpha
Helix 146	AQ2	N	483	495	Right-handed alpha
Helix 147	AQ3	N	499	503	Right-handed 310
Helix 148	AQ4	N	523	528	Right-handed alpha
Helix 149	AQ5	N	530	539	Right-handed alpha
Helix 150	AQ6	N	547	549	Right-handed 310
Helix 151	AQ7	N	550	555	Right-handed alpha
Helix 152	AQ8	N	558	560	Right-handed 310
Helix 153	AQ9	N	561	571	Right-handed alpha
Helix 154	AR1	N	578	581	Right-handed 310
Helix 155	AR2	N	582	584	Right-handed 310
Helix 156	AR3	N	585	599	Right-handed alpha
Helix 157	AR4	N	611	630	Right-handed alpha
Helix 158	AR5	N	659	679	Right-handed alpha
Helix 159	AR6	N	698	704	Right-handed alpha
Helix 160	AR7	N	715	721	Right-handed alpha
Helix 161	AR8	N	739	754	Right-handed alpha
Helix 162	AR9	N	771	786	Right-handed alpha
Helix 163	AS1	N	795	798	Right-handed 310
Helix 164	AS2	N	799	805	Right-handed alpha
Helix 165	AS3	N	822	826	Right-handed 310
Helix 166	AS4	N	841	851	Right-handed alpha
Helix 167	AS5	N	871	876	Right-handed alpha
Helix 168	AS6	N	913	918	Right-handed alpha
Helix 169	AS7	N	928	942	Right-handed alpha
Helix 170	AS8	N	954	959	Right-handed alpha
Helix 171	AS9	N	960	964	Right-handed 310
Helix 172	AT1	N	965	971	Right-handed alpha
Helix 173	AT2	N	1029	1042	Right-handed alpha
Helix 174	AT3	N	1044	1053	Right-handed alpha

There are 23 sheets in PDB entry 8FLJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	23	first strand
Strand 2	A	57	60	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	39	first strand
Strand 2	A	26	31	anti-parallel
Strand 3	A	64	67	parallel
Strand 4	B	64	67	anti-parallel
Strand 5	B	26	31	parallel
Strand 6	B	34	40	anti-parallel
Strand 7	B	45	49	anti-parallel
Strand 8	N	91	93	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	84	first strand
Strand 2	A	91	94	anti-parallel
Strand 3	B	101	106	anti-parallel
Strand 4	B	80	84	anti-parallel
Strand 5	B	57	60	parallel
Strand 6	B	21	23	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	92	94	first strand
Strand 2	B	97	99	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	22	first strand
Strand 2	C	57	60	parallel
Strand 3	C	80	83	parallel
Strand 4	C	93	94	anti-parallel
Strand 5	D	101	106	anti-parallel
Strand 6	D	80	84	anti-parallel
Strand 7	D	55	60	parallel
Strand 8	D	19	23	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	38	first strand
Strand 2	C	26	31	anti-parallel
Strand 3	C	64	67	parallel
Strand 4	D	64	67	anti-parallel
Strand 5	D	26	31	parallel
Strand 6	D	34	40	anti-parallel
Strand 7	D	45	49	anti-parallel
Strand 8	M	91	93	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	47	49	first strand
Strand 2	E	53	59	anti-parallel
Strand 3	E	80	86	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	47	first strand
Strand 2	F	51	58	anti-parallel
Strand 3	F	77	84	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	61	64	first strand
Strand 2	F	71	74	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	47	48	first strand
Strand 2	H	3	4	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	54	60	first strand
Strand 2	G	79	85	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	63	66	first strand
Strand 2	G	73	76	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	51	58	first strand
Strand 2	H	77	84	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	61	64	first strand
Strand 2	H	71	74	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	32	36	first strand
Strand 2	M	2	7	anti-parallel
Strand 3	M	58	64	anti-parallel
Strand 4	M	70	77	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	335	338	first strand
Strand 2	M	345	348	anti-parallel

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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	512	513	first strand
Strand 2	M	474	477	anti-parallel
Strand 3	M	541	545	parallel
Strand 4	M	446	450	parallel
Strand 5	M	572	576	parallel
Strand 6	M	603	606	parallel
Strand 7	M	415	418	parallel
Strand 8	M	642	647	parallel
Strand 9	M	652	657	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	687	690	first strand
Strand 2	M	865	868	parallel
Strand 3	M	835	837	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	1005	1006	first strand
Strand 2	M	995	998	anti-parallel
Strand 3	M	979	985	anti-parallel
Strand 4	M	1054	1058	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	32	36	first strand
Strand 2	N	2	7	anti-parallel
Strand 3	N	58	66	anti-parallel
Strand 4	N	69	77	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	335	338	first strand
Strand 2	N	345	348	anti-parallel

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There are 9 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	512	513	first strand
Strand 2	N	474	477	anti-parallel
Strand 3	N	541	545	parallel
Strand 4	N	446	450	parallel
Strand 5	N	572	576	parallel
Strand 6	N	603	606	parallel
Strand 7	N	414	418	parallel
Strand 8	N	642	647	parallel
Strand 9	N	652	657	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	687	688	first strand
Strand 2	N	865	867	parallel
Strand 3	N	835	837	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FLJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FLJ