Analysis of interatomic Contacts of Structural Units in PDB entry:
8FLO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FLO entry

There is 1 chain in PDB entry 8FLO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 10ARG 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8FLO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
24 28Right-handed 310
Helix 2
AA2
A
32 38Right-handed alpha
Helix 3
AA3
A
39 54Right-handed alpha
Helix 4
AA4
A
78 87Right-handed alpha
Helix 5
AA5
A
104 106Right-handed 310
Helix 6
AA6
A
107 113Right-handed alpha
Helix 7
AA7
A
114 117Right-handed 310
Helix 8
AA8
A
120 133Right-handed alpha
Helix 9
AA9
A
134 160Right-handed alpha
Helix 10
AB1
A
167 171Right-handed alpha
Helix 11
AB2
A
173 185Right-handed alpha
Helix 12
AB3
A
187 189Right-handed 310
Helix 13
AB4
A
190 204Right-handed alpha
Helix 14
AB5
A
212 237Right-handed alpha
Helix 15
AB6
A
241 249Right-handed alpha
Helix 16
AB7
A
257 272Right-handed alpha
Helix 17
AB8
A
273 290Right-handed alpha
Helix 18
AB9
A
290 300Right-handed alpha
Helix 19
AC1
A
300 317Right-handed alpha
Helix 20
AC2
A
347 351Right-handed alpha
Helix 21
AC3
A
385 404Right-handed alpha
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There are 4 sheets in PDB entry 8FLO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
56 59first strand
Strand 2
A
73 76anti-parallel
Strand 3
A
342 346parallel
Strand 4
A
321 326anti-parallel
Strand 5
A
92 93anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
164 166first strand
Strand 2
A
428 430anti-parallel
Strand 3
A
408 409anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
330 332first strand
Strand 2
A
335 337anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
414 415first strand
Strand 2
A
424 426anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il