Analysis of interatomic Contacts of Structural Units in PDB entry:
8FLW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FLW entry

There are 10 chains in PDB entry 8FLW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	GLN 1	LEU 100
H	ASN 100	GLU 100
H	GLY 100	SER 118
L	VAL 2	ARG 108
A	LEU 520	ASP 664
B	LEU 520	ASP 664
C	ASN 33	VAL 505
F	LEU 520	ASP 664
G	ASN 33	VAL 505
I	ASN 33	VAL 505

There are 45 helices in PDB entry 8FLW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	27	32	Right-handed 310
Helix 2	AA2	H	59	62	Right-handed 310
Helix 3	AA3	H	73	76	Right-handed 310
Helix 4	AA4	H	83	87	Right-handed 310
Helix 5	AA5	L	79	83	Right-handed 310
Helix 6	AA6	A	529	534	Right-handed alpha
Helix 7	AA7	A	536	542	Right-handed alpha
Helix 8	AA8	A	570	595	Right-handed alpha
Helix 9	AA9	A	618	622	Right-handed 310
Helix 10	AB1	A	627	635	Right-handed alpha
Helix 11	AB2	A	638	664	Right-handed alpha
Helix 12	AB3	B	529	534	Right-handed alpha
Helix 13	AB4	B	536	542	Right-handed alpha
Helix 14	AB5	B	570	595	Right-handed alpha
Helix 15	AB6	B	618	622	Right-handed 310
Helix 16	AB7	B	627	635	Right-handed alpha
Helix 17	AB8	B	636	638	Right-handed 310
Helix 18	AB9	B	639	663	Right-handed alpha
Helix 19	AC1	C	57	63	Right-handed alpha
Helix 20	AC2	C	98	117	Right-handed alpha
Helix 21	AC3	C	195	198	Right-handed 310
Helix 22	AC4	C	334	350	Right-handed alpha
Helix 23	AC5	C	368	373	Right-handed alpha
Helix 24	AC6	C	387	390	Right-handed 310
Helix 25	AC7	C	476	481	Right-handed alpha
Helix 26	AC8	F	529	534	Right-handed alpha
Helix 27	AC9	F	536	542	Right-handed alpha
Helix 28	AD1	F	572	595	Right-handed alpha
Helix 29	AD2	F	619	624	Right-handed alpha
Helix 30	AD3	F	627	635	Right-handed alpha
Helix 31	AD4	F	638	661	Right-handed alpha
Helix 32	AD5	G	58	64	Right-handed alpha
Helix 33	AD6	G	98	116	Right-handed alpha
Helix 34	AD7	G	334	354	Right-handed alpha
Helix 35	AD8	G	387	390	Right-handed 310
Helix 36	AD9	G	476	484	Right-handed alpha
Helix 37	AE1	I	60	64	Right-handed 310
Helix 38	AE2	I	70	74	Right-handed 310
Helix 39	AE3	I	98	117	Right-handed alpha
Helix 40	AE4	I	122	126	Right-handed 310
Helix 41	AE5	I	195	198	Right-handed 310
Helix 42	AE6	I	334	350	Right-handed alpha
Helix 43	AE7	I	368	373	Right-handed alpha
Helix 44	AE8	I	387	390	Right-handed 310
Helix 45	AE9	I	476	484	Right-handed alpha

There are 33 sheets in PDB entry 8FLW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	6	first strand
Strand 2	H	18	24	anti-parallel
Strand 3	H	78	82	anti-parallel
Strand 4	H	68	71	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	112	115	parallel
Strand 3	H	88	90	anti-parallel
Strand 4	H	33	39	anti-parallel
Strand 5	H	46	51	anti-parallel
Strand 6	H	55	57	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	11	first strand
Strand 2	H	112	115	parallel
Strand 3	H	88	90	anti-parallel
Strand 4	H	33	39	anti-parallel
Strand 5	H	93	97	anti-parallel
Strand 6	H	102	108	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	100	100	first strand
Strand 2	H	100	100	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	7	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	70	75	anti-parallel
Strand 4	L	63	67	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	53	54	first strand
Strand 2	L	45	49	anti-parallel
Strand 3	L	33	38	anti-parallel
Strand 4	L	84	90	anti-parallel
Strand 5	L	102	104	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	603	609	first strand
Strand 2	C	35	40	anti-parallel
Strand 3	C	494	499	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	603	609	first strand
Strand 2	G	35	39	anti-parallel
Strand 3	G	495	499	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	47	first strand
Strand 2	C	486	491	anti-parallel
Strand 3	C	223	228	anti-parallel
Strand 4	C	242	245	anti-parallel
Strand 5	C	84	85	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	55	first strand
Strand 2	C	216	218	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	94	first strand
Strand 2	C	236	239	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	122	first strand
Strand 2	C	201	203	anti-parallel
Strand 3	C	434	435	parallel
Strand 4	C	423	424	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	177	first strand
Strand 2	C	154	161	anti-parallel
Strand 3	C	129	133	anti-parallel
Strand 4	C	190	193	anti-parallel
Strand 5	C	181	183	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	271	273	first strand
Strand 2	C	284	287	anti-parallel
Strand 3	C	452	456	anti-parallel
Strand 4	C	465	470	anti-parallel
Strand 5	C	358	361	parallel
Strand 6	C	393	395	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	377	first strand
Strand 2	C	382	385	anti-parallel
Strand 3	C	414	421	anti-parallel
Strand 4	C	329	333	anti-parallel
Strand 5	C	292	298	anti-parallel
Strand 6	C	443	449	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	302	308	first strand
Strand 2	C	316	322	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	603	609	first strand
Strand 2	I	35	39	anti-parallel
Strand 3	I	495	496	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	47	first strand
Strand 2	G	486	491	anti-parallel
Strand 3	G	223	228	anti-parallel
Strand 4	G	242	245	anti-parallel
Strand 5	G	84	86	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	55	56	first strand
Strand 2	G	75	76	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	91	94	first strand
Strand 2	G	236	239	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	169	177	first strand
Strand 2	G	154	162	anti-parallel
Strand 3	G	129	133	anti-parallel
Strand 4	G	190	193	anti-parallel
Strand 5	G	181	183	anti-parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	259	261	first strand
Strand 2	G	443	456	anti-parallel
Strand 3	G	284	298	anti-parallel
Strand 4	G	330	333	anti-parallel
Strand 5	G	414	420	anti-parallel
Strand 6	G	382	385	anti-parallel
Strand 7	G	374	377	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	271	273	first strand
Strand 2	G	284	298	anti-parallel
Strand 3	G	443	456	anti-parallel
Strand 4	G	465	470	anti-parallel
Strand 5	G	358	361	parallel
Strand 6	G	393	395	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	302	309	first strand
Strand 2	G	315	322	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	423	424	first strand
Strand 2	G	434	435	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	45	47	first strand
Strand 2	I	486	491	anti-parallel
Strand 3	I	223	228	anti-parallel
Strand 4	I	242	245	anti-parallel
Strand 5	I	84	86	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	55	first strand
Strand 2	I	216	218	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	91	94	first strand
Strand 2	I	236	239	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	169	177	first strand
Strand 2	I	154	162	anti-parallel
Strand 3	I	129	133	anti-parallel
Strand 4	I	190	193	anti-parallel
Strand 5	I	181	183	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	202	203	first strand
Strand 2	I	434	435	parallel
Strand 3	I	423	424	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	271	273	first strand
Strand 2	I	284	287	anti-parallel
Strand 3	I	452	457	anti-parallel
Strand 4	I	465	469	anti-parallel
Strand 5	I	358	361	parallel
Strand 6	I	393	394	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	374	378	first strand
Strand 2	I	381	385	anti-parallel
Strand 3	I	414	420	anti-parallel
Strand 4	I	330	333	anti-parallel
Strand 5	I	293	298	anti-parallel
Strand 6	I	443	448	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	305	309	first strand
Strand 2	I	315	319	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FLW

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FLW