Analysis of interatomic Contacts of Structural Units in PDB entry:
8FM1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FM1 entry

There are 12 chains in PDB entry 8FM1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 14	VAL 383
B	SER 11	PRO 382
C	ASN 15	VAL 383
D	PHE 14	PRO 382
E	PHE 14	PRO 382
F	THR 16	GLY 381
G	PHE 14	VAL 383
H	THR 16	PRO 382
I	PHE 14	VAL 383
J	ASN 15	LEU 380
K	PHE 14	PRO 382
L	THR 16	ALA 384

There are144 helices in PDB entry 8FM1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	28	Right-handed alpha
Helix 2	AA2	A	42	46	Right-handed 310
Helix 3	AA3	A	79	81	Right-handed 310
Helix 4	AA4	A	87	93	Right-handed alpha
Helix 5	AA5	A	106	123	Right-handed alpha
Helix 6	AA6	A	137	144	Right-handed alpha
Helix 7	AA7	A	146	157	Right-handed alpha
Helix 8	AA8	A	179	199	Right-handed alpha
Helix 9	AA9	A	218	230	Right-handed alpha
Helix 10	AB1	A	281	289	Right-handed alpha
Helix 11	AB2	A	309	331	Right-handed alpha
Helix 12	AB3	A	342	356	Right-handed alpha
Helix 13	AB4	A	368	371	Right-handed 310
Helix 14	AB5	B	17	28	Right-handed alpha
Helix 15	AB6	B	38	45	Right-handed 310
Helix 16	AB7	B	79	81	Right-handed 310
Helix 17	AB8	B	87	93	Right-handed alpha
Helix 18	AB9	B	106	122	Right-handed alpha
Helix 19	AC1	B	146	157	Right-handed alpha
Helix 20	AC2	B	179	201	Right-handed alpha
Helix 21	AC3	B	218	230	Right-handed alpha
Helix 22	AC4	B	281	289	Right-handed alpha
Helix 23	AC5	B	309	330	Right-handed alpha
Helix 24	AC6	B	342	353	Right-handed alpha
Helix 25	AC7	B	368	371	Right-handed 310
Helix 26	AC8	C	17	28	Right-handed alpha
Helix 27	AC9	C	79	81	Right-handed 310
Helix 28	AD1	C	87	94	Right-handed alpha
Helix 29	AD2	C	106	122	Right-handed alpha
Helix 30	AD3	C	146	157	Right-handed alpha
Helix 31	AD4	C	179	202	Right-handed alpha
Helix 32	AD5	C	218	230	Right-handed alpha
Helix 33	AD6	C	281	289	Right-handed alpha
Helix 34	AD7	C	309	330	Right-handed alpha
Helix 35	AD8	C	342	353	Right-handed alpha
Helix 36	AD9	C	354	359	Right-handed 310
Helix 37	AE1	C	368	371	Right-handed 310
Helix 38	AE2	D	17	28	Right-handed alpha
Helix 39	AE3	D	40	45	Right-handed 310
Helix 40	AE4	D	87	93	Right-handed alpha
Helix 41	AE5	D	106	122	Right-handed alpha
Helix 42	AE6	D	137	143	Right-handed alpha
Helix 43	AE7	D	146	157	Right-handed alpha
Helix 44	AE8	D	179	202	Right-handed alpha
Helix 45	AE9	D	218	230	Right-handed alpha
Helix 46	AF1	D	281	289	Right-handed alpha
Helix 47	AF2	D	309	330	Right-handed alpha
Helix 48	AF3	D	342	353	Right-handed alpha
Helix 49	AF4	D	368	371	Right-handed 310
Helix 50	AF5	E	17	29	Right-handed alpha
Helix 51	AF6	E	42	46	Right-handed 310
Helix 52	AF7	E	87	93	Right-handed alpha
Helix 53	AF8	E	106	122	Right-handed alpha
Helix 54	AF9	E	137	143	Right-handed alpha
Helix 55	AG1	E	146	157	Right-handed alpha
Helix 56	AG2	E	179	199	Right-handed alpha
Helix 57	AG3	E	218	230	Right-handed alpha
Helix 58	AG4	E	281	289	Right-handed alpha
Helix 59	AG5	E	309	329	Right-handed alpha
Helix 60	AG6	E	342	353	Right-handed alpha
Helix 61	AG7	E	368	371	Right-handed 310
Helix 62	AG8	F	17	28	Right-handed alpha
Helix 63	AG9	F	40	45	Right-handed alpha
Helix 64	AH1	F	79	81	Right-handed 310
Helix 65	AH2	F	87	93	Right-handed alpha
Helix 66	AH3	F	106	122	Right-handed alpha
Helix 67	AH4	F	146	157	Right-handed alpha
Helix 68	AH5	F	179	202	Right-handed alpha
Helix 69	AH6	F	218	230	Right-handed alpha
Helix 70	AH7	F	281	289	Right-handed alpha
Helix 71	AH8	F	309	330	Right-handed alpha
Helix 72	AH9	F	342	353	Right-handed alpha
Helix 73	AI1	F	354	356	Right-handed 310
Helix 74	AI2	F	368	371	Right-handed 310
Helix 75	AI3	G	17	28	Right-handed alpha
Helix 76	AI4	G	79	81	Right-handed 310
Helix 77	AI5	G	87	93	Right-handed alpha
Helix 78	AI6	G	106	122	Right-handed alpha
Helix 79	AI7	G	136	143	Right-handed alpha
Helix 80	AI8	G	146	157	Right-handed alpha
Helix 81	AI9	G	179	202	Right-handed alpha
Helix 82	AJ1	G	218	230	Right-handed alpha
Helix 83	AJ2	G	281	289	Right-handed alpha
Helix 84	AJ3	G	309	330	Right-handed alpha
Helix 85	AJ4	G	342	353	Right-handed alpha
Helix 86	AJ5	G	368	371	Right-handed 310
Helix 87	AJ6	H	17	29	Right-handed alpha
Helix 88	AJ7	H	79	81	Right-handed 310
Helix 89	AJ8	H	87	93	Right-handed alpha
Helix 90	AJ9	H	106	123	Right-handed alpha
Helix 91	AK1	H	146	157	Right-handed alpha
Helix 92	AK2	H	179	198	Right-handed alpha
Helix 93	AK3	H	218	230	Right-handed alpha
Helix 94	AK4	H	281	289	Right-handed alpha
Helix 95	AK5	H	309	330	Right-handed alpha
Helix 96	AK6	H	342	353	Right-handed alpha
Helix 97	AK7	H	368	371	Right-handed 310
Helix 98	AK8	I	17	28	Right-handed alpha
Helix 99	AK9	I	38	46	Right-handed 310
Helix 100	AL1	I	87	93	Right-handed alpha
Helix 101	AL2	I	106	122	Right-handed alpha
Helix 102	AL3	I	146	157	Right-handed alpha
Helix 103	AL4	I	179	202	Right-handed alpha
Helix 104	AL5	I	218	230	Right-handed alpha
Helix 105	AL6	I	281	289	Right-handed alpha
Helix 106	AL7	I	309	330	Right-handed alpha
Helix 107	AL8	I	342	356	Right-handed alpha
Helix 108	AL9	I	368	371	Right-handed 310
Helix 109	AM1	J	17	28	Right-handed alpha
Helix 110	AM2	J	42	46	Right-handed 310
Helix 111	AM3	J	79	83	Right-handed 310
Helix 112	AM4	J	87	95	Right-handed alpha
Helix 113	AM5	J	106	122	Right-handed alpha
Helix 114	AM6	J	136	143	Right-handed alpha
Helix 115	AM7	J	146	157	Right-handed alpha
Helix 116	AM8	J	179	202	Right-handed alpha
Helix 117	AM9	J	218	230	Right-handed alpha
Helix 118	AN1	J	281	289	Right-handed alpha
Helix 119	AN2	J	309	330	Right-handed alpha
Helix 120	AN3	J	342	353	Right-handed alpha
Helix 121	AN4	J	368	371	Right-handed 310
Helix 122	AN5	K	17	28	Right-handed alpha
Helix 123	AN6	K	72	83	Right-handed 310
Helix 124	AN7	K	87	92	Right-handed alpha
Helix 125	AN8	K	106	122	Right-handed alpha
Helix 126	AN9	K	137	141	Right-handed alpha
Helix 127	AO1	K	146	157	Right-handed alpha
Helix 128	AO2	K	179	200	Right-handed alpha
Helix 129	AO3	K	218	230	Right-handed alpha
Helix 130	AO4	K	281	289	Right-handed alpha
Helix 131	AO5	K	309	330	Right-handed alpha
Helix 132	AO6	K	342	353	Right-handed alpha
Helix 133	AO7	K	368	371	Right-handed 310
Helix 134	AO8	L	17	28	Right-handed alpha
Helix 135	AO9	L	40	46	Right-handed alpha
Helix 136	AP1	L	87	93	Right-handed alpha
Helix 137	AP2	L	106	122	Right-handed alpha
Helix 138	AP3	L	146	156	Right-handed alpha
Helix 139	AP4	L	179	200	Right-handed alpha
Helix 140	AP5	L	218	230	Right-handed alpha
Helix 141	AP6	L	281	289	Right-handed alpha
Helix 142	AP7	L	309	330	Right-handed alpha
Helix 143	AP8	L	342	353	Right-handed alpha
Helix 144	AP9	L	368	371	Right-handed 310

There are 45 sheets in PDB entry 8FM1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	56	first strand
Strand 2	A	83	86	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	161	first strand
Strand 2	A	128	136	parallel
Strand 3	A	166	170	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	160	161	first strand
Strand 2	A	128	136	parallel
Strand 3	A	210	216	parallel
Strand 4	A	235	237	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	259	261	first strand
Strand 2	A	293	298	anti-parallel
Strand 3	A	270	275	parallel
Strand 4	A	335	340	parallel
Strand 5	A	361	366	parallel
Strand 6	A	374	380	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	83	86	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	161	first strand
Strand 2	B	128	136	parallel
Strand 3	B	166	170	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	161	first strand
Strand 2	B	128	136	parallel
Strand 3	B	210	216	parallel
Strand 4	B	235	237	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	261	first strand
Strand 2	B	293	298	anti-parallel
Strand 3	B	270	275	parallel
Strand 4	B	335	340	parallel
Strand 5	B	361	366	parallel
Strand 6	B	374	380	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	56	first strand
Strand 2	C	83	86	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	161	first strand
Strand 2	C	128	134	parallel
Strand 3	C	166	168	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	160	161	first strand
Strand 2	C	128	134	parallel
Strand 3	C	210	215	parallel
Strand 4	C	235	237	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	259	261	first strand
Strand 2	C	293	298	anti-parallel
Strand 3	C	270	275	parallel
Strand 4	C	335	340	parallel
Strand 5	C	361	366	parallel
Strand 6	C	374	380	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	56	first strand
Strand 2	D	83	86	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	160	161	first strand
Strand 2	D	128	136	parallel
Strand 3	D	166	170	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	160	161	first strand
Strand 2	D	128	136	parallel
Strand 3	D	210	216	parallel
Strand 4	D	234	237	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	261	first strand
Strand 2	D	293	298	anti-parallel
Strand 3	D	270	275	parallel
Strand 4	D	335	340	parallel
Strand 5	D	361	366	parallel
Strand 6	D	374	380	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	166	170	first strand
Strand 2	E	129	136	parallel
Strand 3	E	210	216	parallel
Strand 4	E	235	237	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	259	261	first strand
Strand 2	E	293	298	anti-parallel
Strand 3	E	270	275	parallel
Strand 4	E	335	340	parallel
Strand 5	E	361	366	parallel
Strand 6	E	374	380	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	56	first strand
Strand 2	F	83	86	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	160	161	first strand
Strand 2	F	128	135	parallel
Strand 3	F	166	169	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	160	161	first strand
Strand 2	F	128	135	parallel
Strand 3	F	210	216	parallel
Strand 4	F	235	237	parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	259	261	first strand
Strand 2	F	293	298	anti-parallel
Strand 3	F	270	275	parallel
Strand 4	F	335	340	parallel
Strand 5	F	361	366	parallel
Strand 6	F	374	380	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	56	first strand
Strand 2	G	83	86	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	160	161	first strand
Strand 2	G	128	135	parallel
Strand 3	G	166	169	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	160	161	first strand
Strand 2	G	128	135	parallel
Strand 3	G	210	216	parallel
Strand 4	G	235	238	parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	259	261	first strand
Strand 2	G	293	298	anti-parallel
Strand 3	G	270	275	parallel
Strand 4	G	335	340	parallel
Strand 5	G	361	366	parallel
Strand 6	G	374	380	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	56	first strand
Strand 2	H	83	86	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	160	161	first strand
Strand 2	H	128	134	parallel
Strand 3	H	166	168	parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	160	161	first strand
Strand 2	H	128	134	parallel
Strand 3	H	210	215	parallel
Strand 4	H	235	238	parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	259	261	first strand
Strand 2	H	293	298	anti-parallel
Strand 3	H	270	275	parallel
Strand 4	H	335	340	parallel
Strand 5	H	361	366	parallel
Strand 6	H	374	380	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	53	56	first strand
Strand 2	I	83	86	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	160	161	first strand
Strand 2	I	128	134	parallel
Strand 3	I	166	168	parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	160	161	first strand
Strand 2	I	128	134	parallel
Strand 3	I	210	215	parallel
Strand 4	I	235	237	parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	259	261	first strand
Strand 2	I	293	298	anti-parallel
Strand 3	I	270	275	parallel
Strand 4	I	335	340	parallel
Strand 5	I	361	366	parallel
Strand 6	I	374	379	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	54	55	first strand
Strand 2	J	84	85	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	166	169	first strand
Strand 2	J	129	135	parallel
Strand 3	J	210	216	parallel
Strand 4	J	235	237	parallel

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There are 6 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	259	261	first strand
Strand 2	J	293	298	anti-parallel
Strand 3	J	270	275	parallel
Strand 4	J	335	340	parallel
Strand 5	J	361	366	parallel
Strand 6	J	374	379	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	53	54	first strand
Strand 2	K	85	86	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	160	161	first strand
Strand 2	K	128	136	parallel
Strand 3	K	166	170	parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	160	161	first strand
Strand 2	K	128	136	parallel
Strand 3	K	210	216	parallel
Strand 4	K	235	237	parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	293	298	first strand
Strand 2	K	270	275	parallel
Strand 3	K	335	340	parallel
Strand 4	K	361	366	parallel
Strand 5	K	374	380	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	53	56	first strand
Strand 2	L	83	86	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	160	161	first strand
Strand 2	L	128	135	parallel
Strand 3	L	166	169	parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	160	161	first strand
Strand 2	L	128	135	parallel
Strand 3	L	210	216	parallel
Strand 4	L	235	237	parallel

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There are 6 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	259	261	first strand
Strand 2	L	293	298	anti-parallel
Strand 3	L	270	275	parallel
Strand 4	L	335	340	parallel
Strand 5	L	361	366	parallel
Strand 6	L	374	380	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FM1

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FM1