Analysis of interatomic Contacts of Structural Units in PDB entry:
8FMB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FMB entry

There is 1 chain in PDB entry 8FMB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 446MET 861
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8FMB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
453 469Right-handed alpha
Helix 2
AA2
A
478 485Right-handed alpha
Helix 3
AA3
A
534 549Right-handed alpha
Helix 4
AA4
A
552 556Right-handed 310
Helix 5
AA5
A
564 579Right-handed alpha
Helix 6
AA6
A
596 603Right-handed alpha
Helix 7
AA7
A
603 612Right-handed alpha
Helix 8
AA8
A
613 615Right-handed 310
Helix 9
AA9
A
616 629Right-handed alpha
Helix 10
AB1
A
655 674Right-handed alpha
Helix 11
AB2
A
678 684Right-handed alpha
Helix 12
AB3
A
699 701Right-handed 310
Helix 13
AB4
A
702 712Right-handed alpha
Helix 14
AB5
A
745 751Right-handed alpha
Helix 15
AB6
A
763 780Right-handed alpha
Helix 16
AB7
A
785 800Right-handed alpha
Helix 17
AB8
A
802 808Right-handed alpha
Helix 18
AB9
A
809 814Right-handed 310
Helix 19
AC1
A
829 831Right-handed 310
Helix 20
AC2
A
832 845Right-handed alpha
Helix 21
AC3
A
847 861Right-handed alpha
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There are 2 sheets in PDB entry 8FMB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
689 690first strand
Strand 2
A
693 697anti-parallel
Strand 3
A
583 588anti-parallel
Strand 4
A
715 719anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
726 728first strand
Strand 2
A
731 733anti-parallel
Strand 3
A
742 744anti-parallel
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