Analysis of interatomic Contacts of Structural Units in PDB entry:
8FMR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FMR entry

There are 6 chains in PDB entry 8FMR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 161
B
 ARG 205GLN 271
C
 SER 39LEU 159
D
 MET 1GLU 161
E
 ARG 205GLN 271
F
 SER 39GLY 160
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 8FMR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 11Right-handed alpha
Helix 2
AA2
A
15 28Right-handed alpha
Helix 3
AA3
A
37 47Right-handed alpha
Helix 4
AA4
A
53 62Right-handed alpha
Helix 5
AA5
A
74 83Right-handed alpha
Helix 6
AA6
A
95 105Right-handed alpha
Helix 7
AA7
A
113 123Right-handed alpha
Helix 8
AA8
A
129 141Right-handed alpha
Helix 9
AA9
A
149 157Right-handed alpha
Helix 10
AB1
B
206 213Right-handed alpha
Helix 11
AB2
B
214 220Right-handed alpha
Helix 12
AB3
B
224 230Right-handed alpha
Helix 13
AB4
B
233 270Right-handed alpha
Helix 14
AB5
C
44 58Right-handed alpha
Helix 15
AB6
C
58 63Right-handed alpha
Helix 16
AB7
C
66 79Right-handed alpha
Helix 17
AB8
C
93 135Right-handed alpha
Helix 18
AB9
C
151 156Right-handed alpha
Helix 19
AC1
D
2 9Right-handed alpha
Helix 20
AC2
D
13 20Right-handed alpha
Helix 21
AC3
D
23 28Right-handed alpha
Helix 22
AC4
D
39 49Right-handed alpha
Helix 23
AC5
D
53 63Right-handed alpha
Helix 24
AC6
D
73 83Right-handed alpha
Helix 25
AC7
D
93 105Right-handed alpha
Helix 26
AC8
D
114 123Right-handed alpha
Helix 27
AC9
D
129 141Right-handed alpha
Helix 28
AD1
D
149 157Right-handed alpha
Helix 29
AD2
E
206 216Right-handed alpha
Helix 30
AD3
E
230 267Right-handed alpha
Helix 31
AD4
F
42 80Right-handed alpha
Helix 32
AD5
F
90 95Right-handed alpha
Helix 33
AD6
F
96 135Right-handed alpha
Helix 34
AD7
F
151 159Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8FMR.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
112 113first strand
Strand 2
D
147 148anti-parallel
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