Analysis of interatomic Contacts of Structural Units in PDB entry:
8FNA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8FNA entry

There is 1 chain in PDB entry 8FNA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1131HIS 1345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 8FNA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1137 1144Right-handed alpha
Helix 2
AA2
A
1157 1159Right-handed 310
Helix 3
AA3
A
1171 1175Right-handed 310
Helix 4
AA4
A
1193 1200Right-handed alpha
Helix 5
AA5
A
1211 1220Right-handed alpha
Helix 6
AA6
A
1268 1272Right-handed 310
Helix 7
AA7
A
1289 1294Right-handed alpha
Helix 8
AA8
A
1323 1328Right-handed alpha
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There are 2 sheets in PDB entry 8FNA. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1150 1155first strand
Strand 2
A
1163 1169anti-parallel
Strand 3
A
1177 1183anti-parallel
Strand 4
A
1335 1342anti-parallel
Strand 5
A
1224 1232anti-parallel
Strand 6
A
1235 1246anti-parallel
Strand 7
A
1255 1257anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1201 1202first strand
Strand 2
A
1208 1209anti-parallel
Strand 3
A
1177 1183anti-parallel
Strand 4
A
1335 1342anti-parallel
Strand 5
A
1224 1232anti-parallel
Strand 6
A
1235 1246anti-parallel
Strand 7
A
1260 1262anti-parallel
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