Analysis of interatomic Contacts of Structural Units in PDB entry:
8FNO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FNO entry

There are 12 chains in PDB entry 8FNO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 1	ILE 268
B	LEU 2	ASP 270
C	GLU 212	GLY 277
D	ASN 222	ILE 268
E	A 15	G 33
F	C 5	DA 21
G	PHE 1	ILE 268
H	LEU 2	ASP 270
I	GLU 212	GLY 277
J	ASN 222	ILE 268
K	A 15	G 33
L	C 5	DA 21

There are 50 helices in PDB entry 8FNO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	7	Right-handed alpha
Helix 2	AA2	A	11	16	Right-handed alpha
Helix 3	AA3	A	18	26	Right-handed alpha
Helix 4	AA4	A	29	39	Right-handed alpha
Helix 5	AA5	A	40	44	Right-handed 310
Helix 6	AA6	A	93	108	Right-handed alpha
Helix 7	AA7	A	118	123	Right-handed alpha
Helix 8	AA8	A	123	132	Right-handed alpha
Helix 9	AA9	A	144	147	Right-handed 310
Helix 10	AB1	A	148	166	Right-handed alpha
Helix 11	AB2	A	167	169	Right-handed 310
Helix 12	AB3	A	171	186	Right-handed alpha
Helix 13	AB4	A	195	221	Right-handed alpha
Helix 14	AB5	B	4	16	Right-handed alpha
Helix 15	AB6	B	18	26	Right-handed alpha
Helix 16	AB7	B	29	39	Right-handed alpha
Helix 17	AB8	B	93	108	Right-handed alpha
Helix 18	AB9	B	119	122	Right-handed 310
Helix 19	AC1	B	123	134	Right-handed alpha
Helix 20	AC2	B	150	166	Right-handed alpha
Helix 21	AC3	B	167	169	Right-handed 310
Helix 22	AC4	B	171	186	Right-handed alpha
Helix 23	AC5	B	195	221	Right-handed alpha
Helix 24	AC6	C	213	223	Right-handed alpha
Helix 25	AC7	C	270	277	Right-handed alpha
Helix 26	AC8	G	2	7	Right-handed alpha
Helix 27	AC9	G	11	16	Right-handed alpha
Helix 28	AD1	G	18	26	Right-handed alpha
Helix 29	AD2	G	29	39	Right-handed alpha
Helix 30	AD3	G	40	44	Right-handed 310
Helix 31	AD4	G	93	108	Right-handed alpha
Helix 32	AD5	G	118	123	Right-handed alpha
Helix 33	AD6	G	123	132	Right-handed alpha
Helix 34	AD7	G	144	147	Right-handed 310
Helix 35	AD8	G	148	166	Right-handed alpha
Helix 36	AD9	G	167	169	Right-handed 310
Helix 37	AE1	G	171	186	Right-handed alpha
Helix 38	AE2	G	195	221	Right-handed alpha
Helix 39	AE3	H	4	16	Right-handed alpha
Helix 40	AE4	H	18	26	Right-handed alpha
Helix 41	AE5	H	29	39	Right-handed alpha
Helix 42	AE6	H	93	108	Right-handed alpha
Helix 43	AE7	H	119	122	Right-handed 310
Helix 44	AE8	H	123	134	Right-handed alpha
Helix 45	AE9	H	150	166	Right-handed alpha
Helix 46	AF1	H	167	169	Right-handed 310
Helix 47	AF2	H	171	186	Right-handed alpha
Helix 48	AF3	H	195	221	Right-handed alpha
Helix 49	AF4	I	213	223	Right-handed alpha
Helix 50	AF5	I	270	277	Right-handed alpha

There are 14 sheets in PDB entry 8FNO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	68	first strand
Strand 2	A	71	78	anti-parallel
Strand 3	A	83	89	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	115	first strand
Strand 2	A	136	139	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	261	first strand
Strand 2	A	248	252	anti-parallel
Strand 3	A	239	245	anti-parallel
Strand 4	A	224	227	anti-parallel
Strand 5	A	265	267	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	89	first strand
Strand 2	B	71	78	anti-parallel
Strand 3	B	60	68	anti-parallel
Strand 4	B	112	114	parallel
Strand 5	B	136	138	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	260	first strand
Strand 2	B	249	253	anti-parallel
Strand 3	B	239	244	anti-parallel
Strand 4	B	223	227	anti-parallel
Strand 5	B	265	269	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	257	261	first strand
Strand 2	C	248	252	anti-parallel
Strand 3	C	232	244	anti-parallel
Strand 4	C	224	229	anti-parallel
Strand 5	C	265	268	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	256	261	first strand
Strand 2	D	248	253	anti-parallel
Strand 3	D	236	244	anti-parallel
Strand 4	D	224	227	anti-parallel
Strand 5	D	265	268	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	63	68	first strand
Strand 2	G	71	78	anti-parallel
Strand 3	G	83	89	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	112	115	first strand
Strand 2	G	136	139	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	257	261	first strand
Strand 2	G	248	252	anti-parallel
Strand 3	G	239	245	anti-parallel
Strand 4	G	224	227	anti-parallel
Strand 5	G	265	267	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	84	89	first strand
Strand 2	H	71	78	anti-parallel
Strand 3	H	60	68	anti-parallel
Strand 4	H	112	114	parallel
Strand 5	H	136	138	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	256	260	first strand
Strand 2	H	249	253	anti-parallel
Strand 3	H	239	244	anti-parallel
Strand 4	H	223	227	anti-parallel
Strand 5	H	265	269	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	257	261	first strand
Strand 2	I	248	252	anti-parallel
Strand 3	I	232	244	anti-parallel
Strand 4	I	224	229	anti-parallel
Strand 5	I	265	268	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	256	261	first strand
Strand 2	J	248	253	anti-parallel
Strand 3	J	236	244	anti-parallel
Strand 4	J	224	227	anti-parallel
Strand 5	J	265	268	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FNO

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FNO