Analysis of interatomic Contacts of Structural Units in PDB entry:
8FNT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8FNT entry

There are 7 chains in PDB entry 8FNT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	LYS 35	ARG 934
C	LYS 35	ARG 934
D	LYS 35	ARG 934
F	LYS 35	ARG 934
G	LYS 35	ARG 934
E	LYS 35	ASP 930
A	LYS 35	ARG 934

There are259 helices in PDB entry 8FNT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	35	47	Right-handed alpha
Helix 2	AA2	B	82	93	Right-handed alpha
Helix 3	AA3	B	120	139	Right-handed alpha
Helix 4	AA4	B	150	163	Right-handed alpha
Helix 5	AA5	B	164	169	Right-handed alpha
Helix 6	AA6	B	173	181	Right-handed 310
Helix 7	AA7	B	195	212	Right-handed alpha
Helix 8	AA8	B	228	240	Right-handed alpha
Helix 9	AA9	B	253	269	Right-handed alpha
Helix 10	AB1	B	270	277	Right-handed alpha
Helix 11	AB2	B	279	302	Right-handed alpha
Helix 12	AB3	B	303	305	Right-handed 310
Helix 13	AB4	B	312	317	Right-handed alpha
Helix 14	AB5	B	344	357	Right-handed alpha
Helix 15	AB6	B	361	373	Right-handed alpha
Helix 16	AB7	B	375	394	Right-handed alpha
Helix 17	AB8	B	413	425	Right-handed alpha
Helix 18	AB9	B	425	433	Right-handed alpha
Helix 19	AC1	B	443	457	Right-handed alpha
Helix 20	AC2	B	462	466	Right-handed 310
Helix 21	AC3	B	472	490	Right-handed alpha
Helix 22	AC4	B	493	516	Right-handed alpha
Helix 23	AC5	B	525	540	Right-handed alpha
Helix 24	AC6	B	546	559	Right-handed alpha
Helix 25	AC7	B	597	607	Right-handed alpha
Helix 26	AC8	B	622	632	Right-handed alpha
Helix 27	AC9	B	639	651	Right-handed alpha
Helix 28	AD1	B	706	724	Right-handed alpha
Helix 29	AD2	B	725	727	Right-handed 310
Helix 30	AD3	B	730	752	Right-handed alpha
Helix 31	AD4	B	753	756	Right-handed 310
Helix 32	AD5	B	770	794	Right-handed alpha
Helix 33	AD6	B	814	831	Right-handed alpha
Helix 34	AD7	B	839	847	Right-handed alpha
Helix 35	AD8	B	851	856	Right-handed alpha
Helix 36	AD9	B	864	883	Right-handed alpha
Helix 37	AE1	B	888	897	Right-handed alpha
Helix 38	AE2	C	36	47	Right-handed alpha
Helix 39	AE3	C	82	93	Right-handed alpha
Helix 40	AE4	C	120	139	Right-handed alpha
Helix 41	AE5	C	150	163	Right-handed alpha
Helix 42	AE6	C	164	169	Right-handed alpha
Helix 43	AE7	C	173	181	Right-handed 310
Helix 44	AE8	C	195	212	Right-handed alpha
Helix 45	AE9	C	228	240	Right-handed alpha
Helix 46	AF1	C	253	269	Right-handed alpha
Helix 47	AF2	C	270	277	Right-handed alpha
Helix 48	AF3	C	279	302	Right-handed alpha
Helix 49	AF4	C	303	305	Right-handed 310
Helix 50	AF5	C	312	317	Right-handed alpha
Helix 51	AF6	C	344	357	Right-handed alpha
Helix 52	AF7	C	361	373	Right-handed alpha
Helix 53	AF8	C	375	394	Right-handed alpha
Helix 54	AF9	C	413	425	Right-handed alpha
Helix 55	AG1	C	425	433	Right-handed alpha
Helix 56	AG2	C	443	457	Right-handed alpha
Helix 57	AG3	C	462	466	Right-handed 310
Helix 58	AG4	C	472	490	Right-handed alpha
Helix 59	AG5	C	493	516	Right-handed alpha
Helix 60	AG6	C	525	540	Right-handed alpha
Helix 61	AG7	C	546	559	Right-handed alpha
Helix 62	AG8	C	597	607	Right-handed alpha
Helix 63	AG9	C	622	632	Right-handed alpha
Helix 64	AH1	C	639	651	Right-handed alpha
Helix 65	AH2	C	706	724	Right-handed alpha
Helix 66	AH3	C	725	727	Right-handed 310
Helix 67	AH4	C	730	752	Right-handed alpha
Helix 68	AH5	C	753	756	Right-handed 310
Helix 69	AH6	C	770	794	Right-handed alpha
Helix 70	AH7	C	814	831	Right-handed alpha
Helix 71	AH8	C	839	847	Right-handed alpha
Helix 72	AH9	C	851	856	Right-handed alpha
Helix 73	AI1	C	864	883	Right-handed alpha
Helix 74	AI2	C	888	897	Right-handed alpha
Helix 75	AI3	D	36	47	Right-handed alpha
Helix 76	AI4	D	82	93	Right-handed alpha
Helix 77	AI5	D	120	139	Right-handed alpha
Helix 78	AI6	D	150	163	Right-handed alpha
Helix 79	AI7	D	164	169	Right-handed alpha
Helix 80	AI8	D	173	181	Right-handed 310
Helix 81	AI9	D	195	212	Right-handed alpha
Helix 82	AJ1	D	228	240	Right-handed alpha
Helix 83	AJ2	D	253	269	Right-handed alpha
Helix 84	AJ3	D	270	277	Right-handed alpha
Helix 85	AJ4	D	279	302	Right-handed alpha
Helix 86	AJ5	D	303	305	Right-handed 310
Helix 87	AJ6	D	312	317	Right-handed alpha
Helix 88	AJ7	D	344	357	Right-handed alpha
Helix 89	AJ8	D	361	373	Right-handed alpha
Helix 90	AJ9	D	375	394	Right-handed alpha
Helix 91	AK1	D	413	425	Right-handed alpha
Helix 92	AK2	D	425	433	Right-handed alpha
Helix 93	AK3	D	443	457	Right-handed alpha
Helix 94	AK4	D	462	466	Right-handed 310
Helix 95	AK5	D	472	490	Right-handed alpha
Helix 96	AK6	D	493	516	Right-handed alpha
Helix 97	AK7	D	525	540	Right-handed alpha
Helix 98	AK8	D	546	559	Right-handed alpha
Helix 99	AK9	D	597	607	Right-handed alpha
Helix 100	AL1	D	622	632	Right-handed alpha
Helix 101	AL2	D	639	651	Right-handed alpha
Helix 102	AL3	D	706	724	Right-handed alpha
Helix 103	AL4	D	725	727	Right-handed 310
Helix 104	AL5	D	730	752	Right-handed alpha
Helix 105	AL6	D	753	756	Right-handed 310
Helix 106	AL7	D	770	794	Right-handed alpha
Helix 107	AL8	D	814	831	Right-handed alpha
Helix 108	AL9	D	839	847	Right-handed alpha
Helix 109	AM1	D	851	856	Right-handed alpha
Helix 110	AM2	D	864	883	Right-handed alpha
Helix 111	AM3	D	888	896	Right-handed alpha
Helix 112	AM4	F	36	47	Right-handed alpha
Helix 113	AM5	F	82	93	Right-handed alpha
Helix 114	AM6	F	120	139	Right-handed alpha
Helix 115	AM7	F	150	163	Right-handed alpha
Helix 116	AM8	F	164	169	Right-handed alpha
Helix 117	AM9	F	173	181	Right-handed 310
Helix 118	AN1	F	195	212	Right-handed alpha
Helix 119	AN2	F	228	240	Right-handed alpha
Helix 120	AN3	F	253	269	Right-handed alpha
Helix 121	AN4	F	270	277	Right-handed alpha
Helix 122	AN5	F	279	302	Right-handed alpha
Helix 123	AN6	F	303	305	Right-handed 310
Helix 124	AN7	F	312	317	Right-handed alpha
Helix 125	AN8	F	344	357	Right-handed alpha
Helix 126	AN9	F	361	373	Right-handed alpha
Helix 127	AO1	F	375	394	Right-handed alpha
Helix 128	AO2	F	413	425	Right-handed alpha
Helix 129	AO3	F	425	433	Right-handed alpha
Helix 130	AO4	F	443	457	Right-handed alpha
Helix 131	AO5	F	462	466	Right-handed 310
Helix 132	AO6	F	472	490	Right-handed alpha
Helix 133	AO7	F	493	516	Right-handed alpha
Helix 134	AO8	F	525	540	Right-handed alpha
Helix 135	AO9	F	546	559	Right-handed alpha
Helix 136	AP1	F	597	607	Right-handed alpha
Helix 137	AP2	F	622	632	Right-handed alpha
Helix 138	AP3	F	639	651	Right-handed alpha
Helix 139	AP4	F	706	724	Right-handed alpha
Helix 140	AP5	F	725	727	Right-handed 310
Helix 141	AP6	F	730	752	Right-handed alpha
Helix 142	AP7	F	753	756	Right-handed 310
Helix 143	AP8	F	770	794	Right-handed alpha
Helix 144	AP9	F	814	831	Right-handed alpha
Helix 145	AQ1	F	839	847	Right-handed alpha
Helix 146	AQ2	F	851	856	Right-handed alpha
Helix 147	AQ3	F	864	883	Right-handed alpha
Helix 148	AQ4	F	888	897	Right-handed alpha
Helix 149	AQ5	G	36	47	Right-handed alpha
Helix 150	AQ6	G	82	93	Right-handed alpha
Helix 151	AQ7	G	120	139	Right-handed alpha
Helix 152	AQ8	G	150	163	Right-handed alpha
Helix 153	AQ9	G	164	169	Right-handed alpha
Helix 154	AR1	G	173	181	Right-handed 310
Helix 155	AR2	G	195	212	Right-handed alpha
Helix 156	AR3	G	228	240	Right-handed alpha
Helix 157	AR4	G	253	269	Right-handed alpha
Helix 158	AR5	G	270	277	Right-handed alpha
Helix 159	AR6	G	279	302	Right-handed alpha
Helix 160	AR7	G	303	305	Right-handed 310
Helix 161	AR8	G	312	317	Right-handed alpha
Helix 162	AR9	G	344	357	Right-handed alpha
Helix 163	AS1	G	361	373	Right-handed alpha
Helix 164	AS2	G	375	394	Right-handed alpha
Helix 165	AS3	G	413	425	Right-handed alpha
Helix 166	AS4	G	425	433	Right-handed alpha
Helix 167	AS5	G	443	457	Right-handed alpha
Helix 168	AS6	G	462	466	Right-handed 310
Helix 169	AS7	G	472	490	Right-handed alpha
Helix 170	AS8	G	493	516	Right-handed alpha
Helix 171	AS9	G	525	540	Right-handed alpha
Helix 172	AT1	G	546	559	Right-handed alpha
Helix 173	AT2	G	597	607	Right-handed alpha
Helix 174	AT3	G	622	632	Right-handed alpha
Helix 175	AT4	G	639	651	Right-handed alpha
Helix 176	AT5	G	706	724	Right-handed alpha
Helix 177	AT6	G	725	727	Right-handed 310
Helix 178	AT7	G	730	752	Right-handed alpha
Helix 179	AT8	G	753	756	Right-handed 310
Helix 180	AT9	G	770	794	Right-handed alpha
Helix 181	AU1	G	814	831	Right-handed alpha
Helix 182	AU2	G	839	847	Right-handed alpha
Helix 183	AU3	G	851	856	Right-handed alpha
Helix 184	AU4	G	864	883	Right-handed alpha
Helix 185	AU5	G	888	897	Right-handed alpha
Helix 186	AU6	E	36	47	Right-handed alpha
Helix 187	AU7	E	81	93	Right-handed alpha
Helix 188	AU8	E	120	139	Right-handed alpha
Helix 189	AU9	E	150	163	Right-handed alpha
Helix 190	AV1	E	164	169	Right-handed alpha
Helix 191	AV2	E	173	181	Right-handed 310
Helix 192	AV3	E	195	212	Right-handed alpha
Helix 193	AV4	E	228	240	Right-handed alpha
Helix 194	AV5	E	253	269	Right-handed alpha
Helix 195	AV6	E	270	277	Right-handed alpha
Helix 196	AV7	E	279	302	Right-handed alpha
Helix 197	AV8	E	303	305	Right-handed 310
Helix 198	AV9	E	312	317	Right-handed alpha
Helix 199	AW1	E	344	357	Right-handed alpha
Helix 200	AW2	E	361	373	Right-handed alpha
Helix 201	AW3	E	375	394	Right-handed alpha
Helix 202	AW4	E	413	425	Right-handed alpha
Helix 203	AW5	E	425	433	Right-handed alpha
Helix 204	AW6	E	443	457	Right-handed alpha
Helix 205	AW7	E	462	466	Right-handed 310
Helix 206	AW8	E	472	490	Right-handed alpha
Helix 207	AW9	E	493	516	Right-handed alpha
Helix 208	AX1	E	525	540	Right-handed alpha
Helix 209	AX2	E	546	559	Right-handed alpha
Helix 210	AX3	E	597	607	Right-handed alpha
Helix 211	AX4	E	622	632	Right-handed alpha
Helix 212	AX5	E	639	651	Right-handed alpha
Helix 213	AX6	E	706	724	Right-handed alpha
Helix 214	AX7	E	725	727	Right-handed 310
Helix 215	AX8	E	730	752	Right-handed alpha
Helix 216	AX9	E	753	756	Right-handed 310
Helix 217	AY1	E	770	794	Right-handed alpha
Helix 218	AY2	E	814	831	Right-handed alpha
Helix 219	AY3	E	839	847	Right-handed alpha
Helix 220	AY4	E	851	856	Right-handed alpha
Helix 221	AY5	E	864	883	Right-handed alpha
Helix 222	AY6	E	888	896	Right-handed alpha
Helix 223	AY7	A	36	47	Right-handed alpha
Helix 224	AY8	A	82	93	Right-handed alpha
Helix 225	AY9	A	120	139	Right-handed alpha
Helix 226	AZ1	A	150	163	Right-handed alpha
Helix 227	AZ2	A	164	169	Right-handed alpha
Helix 228	AZ3	A	173	181	Right-handed 310
Helix 229	AZ4	A	195	212	Right-handed alpha
Helix 230	AZ5	A	228	240	Right-handed alpha
Helix 231	AZ6	A	253	269	Right-handed alpha
Helix 232	AZ7	A	270	277	Right-handed alpha
Helix 233	AZ8	A	279	302	Right-handed alpha
Helix 234	AZ9	A	303	305	Right-handed 310
Helix 235	BA1	A	312	317	Right-handed alpha
Helix 236	BA2	A	344	357	Right-handed alpha
Helix 237	BA3	A	361	373	Right-handed alpha
Helix 238	BA4	A	375	394	Right-handed alpha
Helix 239	BA5	A	413	425	Right-handed alpha
Helix 240	BA6	A	425	433	Right-handed alpha
Helix 241	BA7	A	443	457	Right-handed alpha
Helix 242	BA8	A	462	466	Right-handed 310
Helix 243	BA9	A	472	490	Right-handed alpha
Helix 244	BB1	A	493	516	Right-handed alpha
Helix 245	BB2	A	525	540	Right-handed alpha
Helix 246	BB3	A	546	559	Right-handed alpha
Helix 247	BB4	A	597	607	Right-handed alpha
Helix 248	BB5	A	622	632	Right-handed alpha
Helix 249	BB6	A	639	651	Right-handed alpha
Helix 250	BB7	A	706	724	Right-handed alpha
Helix 251	BB8	A	725	727	Right-handed 310
Helix 252	BB9	A	730	752	Right-handed alpha
Helix 253	BC1	A	753	756	Right-handed 310
Helix 254	BC2	A	770	794	Right-handed alpha
Helix 255	BC3	A	814	831	Right-handed alpha
Helix 256	BC4	A	839	847	Right-handed alpha
Helix 257	BC5	A	851	856	Right-handed alpha
Helix 258	BC6	A	864	883	Right-handed alpha
Helix 259	BC7	A	888	897	Right-handed alpha

There are 14 sheets in PDB entry 8FNT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	106	first strand
Strand 2	B	216	219	parallel
Strand 3	B	246	251	parallel
Strand 4	B	71	74	parallel
Strand 5	B	307	308	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	573	576	first strand
Strand 2	B	617	621	anti-parallel
Strand 3	B	608	611	anti-parallel
Strand 4	B	654	655	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	105	106	first strand
Strand 2	C	216	219	parallel
Strand 3	C	246	251	parallel
Strand 4	C	71	74	parallel
Strand 5	C	307	308	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	573	576	first strand
Strand 2	C	617	621	anti-parallel
Strand 3	C	608	611	anti-parallel
Strand 4	C	654	655	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	105	106	first strand
Strand 2	D	216	219	parallel
Strand 3	D	246	251	parallel
Strand 4	D	71	74	parallel
Strand 5	D	307	308	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	573	576	first strand
Strand 2	D	617	621	anti-parallel
Strand 3	D	608	611	anti-parallel
Strand 4	D	654	655	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	105	106	first strand
Strand 2	F	216	219	parallel
Strand 3	F	246	251	parallel
Strand 4	F	71	74	parallel
Strand 5	F	307	308	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	573	576	first strand
Strand 2	F	617	621	anti-parallel
Strand 3	F	608	611	anti-parallel
Strand 4	F	654	655	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	105	106	first strand
Strand 2	G	216	219	parallel
Strand 3	G	246	251	parallel
Strand 4	G	71	74	parallel
Strand 5	G	307	308	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	573	576	first strand
Strand 2	G	617	621	anti-parallel
Strand 3	G	608	611	anti-parallel
Strand 4	G	654	655	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	105	106	first strand
Strand 2	E	216	219	parallel
Strand 3	E	246	251	parallel
Strand 4	E	71	74	parallel
Strand 5	E	307	308	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	573	576	first strand
Strand 2	E	617	621	anti-parallel
Strand 3	E	608	611	anti-parallel
Strand 4	E	654	655	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	106	first strand
Strand 2	A	216	219	parallel
Strand 3	A	246	251	parallel
Strand 4	A	71	74	parallel
Strand 5	A	307	308	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	573	576	first strand
Strand 2	A	617	621	anti-parallel
Strand 3	A	608	611	anti-parallel
Strand 4	A	654	655	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8FNT

Analysis of interatomic Contacts of Structural Units in PDB entry:
8FNT